Transposon
Name: Tn5501.12
Family: Tn3        Group: Tn3000
Evidence of Transposition: no
 Host     

Host Organism:Pseudomonas aeruginosa PA83 Molecular Source:plasmid unnamed1
Place of Origin:Tubingen, Germany Date of Isolation:2017
Other Geographic Information:clinical isolate from patient with P. aeruginosa bloodstream infection Department of Hematology of the hospital of Universityof Tubingen

 Map     



 Terminal Inverted Repeats (IR)     

IRL (Length: 38 bp)GGGGATGTAAGCCGGAACCCCAGAAATTTCCGTCACCC
IRR (Length: 38 bp)GGGGTTCTAAGCCAGAACCGCCGAAATTTCCGTCATCC

 Sequence     
DNA SequenceLength  7168 
--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGGGATGTAA GCCGGAACCC CAGAAATTTC CGTCACCCTA GTTGGGTGGG CTCAACACTC GTGTCACCAG CTACCTTCTG GAGAATCGAG CTCGGCCATC 100
CCTCCCTGGA CGGGCATCGC TCGACGATGT TCAACGGCTC CCTCACGGGG CCGTCGTTTT GTGGGGGCTA TTCCATCCAC AAGTCGTCGA GGTTCTTGAA 200
GTTCCAGAGC GTCGGGTCTT CGGGGCCAGT GATACTGTCC TTGCAACTCG TGGCCGCCAG GTCGATGGTC TGCATCGGGA TCGGCTCTCT CGAGCGTAGC 300
GAGAAGAACA CGCGAACCTT GGGAGTCAGC AGTGATTCCA TTCCCGGCTC AACGACAACG GCCAGACGCT GAGAGGACAG GCGAACCAAG GAGCCGACGG 400
GGTAGATGCC CACGGCCTTG ACGAAGGCGT GGAAGATGCG TTTGTCGAAA TGGCCCTCCC ACTTGGCCAT CTGCCGCATC GCCGCGGACG GGTCCCACGG 500
CTTTTTGTAG GCTCGCTCCG ACGTCACGGC ATCATAGACG TCGCAGATTG CGCCCATGCG GGCCAGGAGT GAAATGGCGT CACCGGCCAA GCGATCCGGG 600
TAGCCGGTTC CGTCGATCTT CTCGTGATGG TGCAGGGCAA TGTCCACCAC CCCGGGCTCG GCCCCGCCTG CGCGCAGCAT CTTTGCGCCC TCCACAGGGT 700
GGCGCTTCAT GATGGCGAAC TCGGCATCGG TGAGCTTGCC TGGTTTGTTA AGCACTTCCA GCGGCATCGC GGCCTTGCCT AGGTCGTGCA TCAGTCCGCC 800
GATGCCAGCC AGGCGCGTTT GCTCCTCGTC TAGATCGAGA TGCCGGGCCA GCGATAGCAT CAGGGCGCAG ACGGCAACCG AGTGCAGGTA GGTGTAATCG 900
TCGTGCGTTT TGATGCGTGC GACGCTGATG AGGGCATGAG GTTGGCGCAG CACCGAGGCA GCGATTTCTC CGACCAGCGG CAACGTCGTG CTTGGGTCGA 1000
CGGCCTTGCC AAGCCGGGCT TCCTGGAACA TGTCCATGAC TTGGGACTTG GCCGCAAGAC AGAGTTTCCG TGCATAACAC ATTTCGCTCT CCATTGAGGT 1100
TGCGCCGTCA CTTTTCTTGC TTAGTGGACT AGACGGCAGA GATTGCTCCT CCGACAATTC TCTGGGCTCT GGGCTCTGGG CTCTGGGCTC TGGGCTCTGG 1200
GCTCTGGGCT CTCTGGGCTC TCTGGGCTCT CTGGGCTCTC TGGGCTCTCT GGGTCGACTT GGCTTTTGGC CAAGTCGACC CAGACCTCCC CGACGCCACA 1300
TTCTCGAATG GCAGAGAGAT CCTGAGGCTC GGTCAGCAGG AAGCTGCCGC GCCAGAATGG GTGTCGAACC CAAGAGCCGG CGAGCTTGTG GATGTACATG 1400
CCGAGACGAA GCTCGGATAC GGGAATGCGT TTTACCAACT TATTTTCCTT TCTGAGTTGG GTGGTTAGGC GTGCGCCGAG GCTGGCACCC AGCGGTAGAG 1500
CGGAGGTAAG GTCACGCCAA GATTCTTGGA TCAGCCGGAA CCGCCGAAAT TTCCGTCAGC CGATCAACAT GGCTTTGTCT CGCGCTCGGT CGATGCGTTC 1600
CTGCATCGCC TGCATGACTT CTTCGTGGGT GTACGACTTG GCGTTGGGGT CGTCGGCCTC TCGGAGAGCT TCCTCGACCT CGCGGGTCAT CCGCGCATAT 1700
TCTTCCGGCC ACAGCGCTTG CTCCATGCGC AGCGACGCCT GCCCAAGCAG GTGCAGCAGG CCGAACAGCC GCATGTCATT GGTGGCGACG ACGTGCTCTC 1800
GAATCCGCTC CTGGATCACC TCGCAGGCCC GATGCGCCTC TGGCGTCGCC GTGCCCTCGT AGCCGGCTGG GAGTTCTGCT TCTTCAGCGA TTCGCGCCCA 1900
AGCGATAGCC AGCGCCTCGA TGGTGGACAG GTTCATTTGC TCATCCACTT GCGCAGCAGA CGCTTTTTCA GGGAGGCGCG CTCTTGCGGA TTGCGTCCCT 2000
TGTGGTTGGC AATGCGATCC GCCGTGGCGG CCTGGCGCTT GATGGGCCAG TAGGAGCGGC CATCCTTACC CATCGACCAG ACGTTGCTGA CCTGGTTTTC 2100
CAGTAGAGGC AGATGGGCGC ATAGAGCTTC CGGCGACGCG CTGGCCAGCG CGGTGCGCTC GTGGGTTCGC CAGCGCTGAT GCCAGAGTTT CTTGTCCTCG 2200
CGCTCGCTAC GGCAGGTCGT GTGCCCAACG ATGGGCGTTT TGCGGCGGCT GCGGCTCATG ATGTGGTTGT CTCCAAGAAC ATTCAGGACA GGCTTTCTGG 2300
GTAGAGCGCC GTCAACCGGG ACAGGGTTTC TTGCACTTGT TCCAGCGAGG TCATCAGATG ATCAACCTGA TCCTGAAGAT CCACGGCGAG ATCAAATAGC 2400
TCAGCCACTC GGCTGCGTGA TCCCTCGTTG AACGCGGCCA TTGCCAGTTG ATGCAGCTTC AACAGGTCGG TGCGCAGTTG CGGAGGTGCG CCGTCTGCGC 2500
TGTCATTCAA ATCGCCGCGC AGCACGTCCA CGGCATCGAC TGCACGCAGC AGTGCCGTGG TATCGAAATT CTCGGGAGTC AGTTCGTCCC ATTCGTCGTC 2600
GGTGATGCGG GCTGCCATCA GGAGAGCTCC GATTAAGCGG TTGCGAGCGT TAGATGCCCG ATCGGCTCGG CTGCTGGCCG TACCTTGATT TCGATGTCGT 2700
AGCCGAGGCG ATTCAGACAA TCCATCAGCT TGCGTTCGGA TAGATTGGTG AAGTCGCCGC GCATCATGCC CGACACCTTC GGTTGCGGGA TGCCCATGCG 2800
TTTGGCCGCC GCTTGTTGAG TCAGCCCAAG GGCGCGCATG GCCCTCCTGA TCTCGACCAC CAGGCCGGTC TTGATCTTGA GCTTTTCAGC GTCAGGCAGT 2900
CCAAGGTCGG CAAAGACGTT GCCCGAGCTG CGCTGAACCT CGACGCCTTC AATGATTCGT TTTTGCATTT CGTAGCTCCT GTGCCAATAC CTCGGCCACC 3000
TTCAGCCGAG CGCGGATGAT GTCCATGTCG GCCTTTGGCG TGGCGATTCC GCTCTTGCTC TTCTTCTGGA AGCAGTGCAG GACGAACACC GCTTCCGCAA 3100
ACTTGACCGT GTATACCGCT CGATAGGTGC CGCCGGCATC GTCTTCGACG ACCTCCAGCA CGCCGGCACC ACCGAACCCC TTGAGCACCT TTGCTGCGTC 3200
ATCCTGATCG CCTATCTGCG CCAACGAGAG CGCGTAACCG AAACGGCGAC GCACGTCGGA CGGCAACGCC ATCAAATCCT TGTGGCTGCT CGCGATCCAT 3300
TCGAGCGGTT TTTCTTTGTT TGTCATGACG GAATTTTATA CCTGTTCAGG TAATGATGTA AACGCGGCAA CCTCAAGGAG GTGTCGTAAA ACATTTGTTT 3400
TTCGACAGGC CTTCAACGGT CCTCTGCACC AACCTCCGAG TGGCCGCAAA ATTGTGCGGA AAACTCTGTC GCCAGACGCT ACCATACGGA AACCTCGTCT 3500
TAATGGTTTT CCGCTTATGT TGGTAGGTTA CATGCGCGTG TCGTCGGACT CCGACCGCCA GAGCACGAAC TTGCAGCGCG ATGCGCTGCT CGCCGTCGGC 3600
GTCGATGCGC GGCATCTGTT CGAGGATCAT GCTTCCGGCG CGAAGGACGA CCGCGCGGGC CTGGCGCGGG CGCTCGAATT CGTTCGCCCT GGCGACGTGT 3700
TGGTCGTGTG GAAGCTCGAC CGGCTCGGCC GTTCGTTGTC GCACTTGCTC GCCATCGTGA CCTCGCTCAA GAAAAAGCAG GTGGCGTTCC GCTCGCTGAC 3800
GGAGAACCTG GATACCACGA CGCCCTCGGG CGAGTTTCTG TTCCAGGTGT TCGGCGCGCT CGCGCAGTAC GAACGCGCCT TGATCCAGGA ACGTGTCGTC 3900
GCCGGTCTGG CTGCCGCCCG CAAACGCGGC CGGATCGGCG GCCGGCCGCA GGCGATCACC GGCGAGAAGC TGGAGGCCAT CGTCGCTGCG CTCGATGGCG 4000
GCATGTCCAA GGCGGCGGTG TGCCGCAACT TCGGCGTCAA GCGAACCACG CTGATCGAGA CCCTGGCACG GGTTGGTTGG ACGGGCTCTC GTGGAGCGTC 4100
ATCGCGATGA CGACCAAGAG CGAACGATTG ACCGTCCTGT CGGACGCCGA GCAGGAAGCC CTGTACGGCC TGCCGGACTT CGACGACGCC CAGCGGCTGG 4200
AATACTTGGC GTTGACTGAA ACCGAACTGG CGCTCGCCAG CAGCCGGCCT GGTCTCCATG CCCAGGTCTA TTGCATCTTG CAGATCGGTT ACTTCAAGGC 4300
CAAGCATGCC TTCTTCCGCT TCGACTGGAG TGAGGTCGAG CACGATTGCG CCTTCGTGCT GAGCCGCTAC TTCCACGGCG AGTCCTTCGA GCACAAGCCA 4400
ATCTCCAAGC ACGAGCACTA CACCCAGCGC GAGTGGATTG CCGATCTGTT CGGCTACCGG CCGTGGGCGG CCGAGTTCCT GGCGCAGCTC GCGCAGCAGG 4500
CCGCGCAGAC CGTGCGGCGC GACGTGATGC CGGGGTTCAT CGCCGCCGAG CTGATCGTCT GGCTAAACGA GCACAAGATC ATCCGGCCCG GCTATACCAC 4600
CCTGCAAGAG CTGGTGAGCG AAGCCCTGTC CGCCGAGCGT CGGCGGCTGG CTGGCCTGCT GTCGGAAGTG TTGGACGAAT CGGCCAAGGC CGCGCTGGGT 4700
CGGCTTCTAG TGCGTGACGA CACCCTGTCG CAATTGGCGG CGCTCAAGCA GGACGCCAAG GACTTTGGCT GGCGTCAGAT GGCCCGCGAA CGCGAAAAGC 4800
GCGCCACGCT GGAGCCGCTG CACCGGATCG CCAAGGCGCT GCTGCCCAAG CTCGGCGTCT CGCAGCAGAA TCTGCTGTAC TACGCCAGCC TGGCGAACTT 4900
CTACACCGTC CACGATCTAC GCAACCTGAA GGCCGATCAG ACCTACCTCT ACCTGCTTTG CTATGCCTGG GTGCGCTACC GGCAGCTTTC CGACAACCTG 5000
GTCGATGCGA TGGCCTACCA CATGAAGCAG TTGGAGGACG AAAGCAGTGC GGGCGCAAAG CAATCCTTTG TCGCCGAGCA GGTGCGCCGT CAGCAAGACA 5100
CACCGCAGGT CGGCCGCCTG CTGTCGCTTT ACATCGACGA CAGCGTGCCC GATCCCACGC CGTTCGGCGA TGTGCGCCAG CGCGCCTACA AAATCATGCC 5200
CCGCGATACG CTGCAAACCA CCGCGCAGCG CATGAGCGTG AAGCCGGTGA GCAAGCTGGC TTTGCACTGG CAGGCGGTGG ACGGCCTGGC TGAGCGCATC 5300
CGCCGCCATC TTCGGCCGCT GTATGTCGCG CTCGACCTCG CTGGCACTGA TCCGGGCAGC CCGTGGCTCG TGGCGCTGGC CTGGGCCAAG GACGTGTTCG 5400
CCAAACAGCA GCGCCTATCG CAACGGCCGC TCGCCGAATG TCCAGCGGCC ACGCTGCCGA AACGCTTGCG ACCGTACCTG CTGACCTTCG ATGCCGATGG 5500
CAAGCCGACG GACCTGCATG CCGACCGCTA CGAGTTCTGG CTGTACCGCC AGGTCAGGAA GCGCTTCCAG TCGGGTGAAC TCTACCTCGA CGACAGCTTG 5600
CAGCACCGGC ATTTTTCCGA CGAGCTGGTT TCGCTGGATG AGAAGGCCGC CGTGCTGGCG CAGATCGACA TCCCGTTCCT GCGGCAGCCA CTCGATGCCC 5700
AGCTCGATGC GCTCGCGACC GAGCTGCGCG CTCAGTGGCT GGCCTTCAAC CGCGAGCTGA AGCAGGGCAA GCTGACGCAC CTAGAATACG ACAAGGACAC 5800
GCAGAAGCTG ACATGGCGCA AGCCCAAGGG CGAGAACCAG AAGGCGCGCG AGAAGGCGTT CTACGAGCAA CTGCCGTTCT GCGACGTGGC CGACGTGTTC 5900
CGCTTCGTCA ACGGCCAGTG CCAGTTCCTG TCGGCGCTGA CGCCTTTGCA GCCGCGCTAT GCGAAGAAGG TCGCCGACGC CGACAGCCTG ATGGCGGTCA 6000
TCATCGCGCA GGCGATGAAC CACGGCAACC AGGTCATGGC ACGCACCAGC GACATCCCGT ACCACGTGCT GGAGAGCGCC TACCAACAGT ACCTGCGCCA 6100
CGCAACGCTG CACGCGGCCA ACGACTGCAT CAGCAACGCC ATCGCCGCGC TGCCGATCTT CCCGTACTAC TCGTTCGACC TCGATGCACT GTACGGTGCC 6200
GTCGATGGTC AGAAATTCGG CGTCGAGCGG CCGACCGTGA AAGCGCGCCA CTCGCGCAAA TACTTTGGGC GCGGCAAGGG CGTGGTCGCC TACACGCTGC 6300
TGTGCAACCA CGTGCCGCTC AACGGCTACC TGATCGGCGC GCACGATTAC GAGGCCCATC ACGTGTTCGA CATCTGGTAT CGCAACACGT CGGACATCGT 6400
GCCGACCGCG ATCACCGGCG ACATGCACAG CGTCAACAAG GCCAACTTCG CTATCCTGCA CTGGTTCGGC CTGCGTTTCG AGCCGCGCTT CACCGACCTT 6500
GGCGATCAGT TGAAGGAACT CTACAGTGCC GACGATCCGG CGCTGTACGA TCAGTGCCTG ATCCGGCCGG CCGGGAGAAT CGACCGCGAT CTCATAGTCA 6600
GCGAGAAGCC GAACCTCGAC CAGATTGTCG CCACGCTCGG ACTGAAGGAG ATGACGCAGG GCACGCTGAT CCGCAAGCTA TGCACCTACA CCGCGCCGAA 6700
CCCCACGCGG CGCGCGGTGT TCGAGTTCGA CAAGCTCATC CGCAGCATCT ACACGCTGCG CTACCTGCGC GATCCGCAAC TGGAGCGCAA CGTTCACCGC 6800
TCACAGAACC GCATCGAGTC CTATCACCAG CTACGCTCAA CCATCGCCCA GGTCGGCGGC AAGAAGGAAT TGACCGGGCG CACCGACATC GAAATTGAGA 6900
TCAGCAACCA GTGCGCCAGG CTGATCGCCA ACGCGGTCAT CTTCTACAAC TCGGCCATCC TCTCGCGGCT GCTGATGAAG TACGAGGCGA GCGGCAACGC 7000
CAAGGCGCAC GCTCTCCTGA CCCAGATATC GCCGGCGGCC TGGCGGCACA TCCTGCTGAA CGGGCATTAC ACCTTCCAGA GCGACGGCAA GATGATCGAC 7100
CTGGATGCGC TCGTGGCGGG GCTGGAGCTG GGATGACGGA AATTTCGGCG GTTCTGGCTT AGAACCCC

 Recombination Sites     

Name Coordinates Gene Sequence
res 3342-3509 168 CTGTTCAGGT AATGATGTAA ACGCGGCAAC CTCAAGGAGG TGTCGTAAAA CATTTGTTTT
TCGACAGGCC TTCAACGGTC CTCTGCACCA ACCTCCGAGT GGCCGCAAAA TTGTGCGGAA
AACTCTGTCG CCAGACGCTA CCATACGGAA ACCTCGTCTT AATGGTTT
res_site_I 3342-3371 30 CTGTTCAGGT AATGATGTAA ACGCGGCAAC
res_site_II 3379-3409 31 AGGTGTCGTA AAACATTTGT TTTTCGACAG G
res_site_II 3441-3484 44 TGGCCGCAAA ATTGTGCGGA AAACTCTGTC GCCAGACGCT ACCA
res_site_III 3485-3509 25 TACGGAAACC TCGTCTTAAT GGTTT

 ORFs     
ORF Summary
Gene Name Associated TE Coordinates Class Sub Class Orientation
rpfG Tn5501.12 168-1301 Passenger Gene Other -
pDK1_p018 Tn5501.12 1556-1948 Passenger Gene Hypothetical -
pDK1_p017 Tn5501.12 1933-2259 Passenger Gene Hypothetical -
WP_000741275.1 Tn5501.12 2316-2618 Passenger Gene Hypothetical -
HTH_37 Tn5501.12 2633-2968 Passenger Gene Antitoxin -
Gp49 Tn5501.12 2949-3326 Passenger Gene Toxin -
tnpR Tn5501.12 3532-4110 Accessory Gene Resolvase +
tnpA Tn5501.12 4107-7136 Transposase   +

ORF Details
Gene Name Protein Name Associated TE Gene Length Coordinates Strand
rpfG RpfG Tn5501.12 1134 168-1301 -
Class:   Passenger Gene
Sub Class:   Other
Comment:   variant of Tn4662a metal dependent phosphohydrolases with conserved HD motif
Protein Sequence:  
MWRRGGLGRL GQKPSRPREP REPREPREPR EPRAQSPEPR AQSPEPRELS EEQSLPSSPL SKKSDGATSM ESEMCYARKL CLAAKSQVMD MFQEARLGKA
VDPSTTLPLV GEIAASVLRQ PHALISVARI KTHDDYTYLH SVAVCALMLS LARHLDLDEE QTRLAGIGGL MHDLGKAAMP LEVLNKPGKL TDAEFAIMKR
HPVEGAKMLR AGGAEPGVVD IALHHHEKID GTGYPDRLAG DAISLLARMG AICDVYDAVT SERAYKKPWD PSAAMRQMAK WEGHFDKRIF HAFVKAVGIY
PVGSLVRLSS QRLAVVVEPG MESLLTPKVR VFFSLRSREP IPMQTIDLAA TSCKDSITGP EDPTLWNFKN LDDLWME

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
pDK1_p018 PDK1_p018 Tn5501.12 393 1556-1948 -
Class:   Passenger Gene
Sub Class:   Hypothetical
Protein Sequence:  
MDEQMNLSTI EALAIAWARI AEEAELPAGY EGTATPEAHR ACEVIQERIR EHVVATNDMR LFGLLHLLGQ ASLRMEQALW PEEYARMTRE VEEALREADD
PNAKSYTHEE VMQAMQERID RARDKAMLIG

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
pDK1_p017 PDK1_p017 Tn5501.12 327 1933-2259 -
Class:   Passenger Gene
Sub Class:   Hypothetical
Protein Sequence:  
MSRSRRKTPI VGHTTCRSER EDKKLWHQRW RTHERTALAS ASPEALCAHL PLLENQVSNV WSMGKDGRSY WPIKRQAATA DRIANHKGRN PQERASLKKR
LLRKWMSK

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
WP_000741275.1 WP_000741275.1 Tn5501.12 303 2316-2618 -
Class:   Passenger Gene
Sub Class:   Hypothetical
Protein Sequence:  
MAARITDDEW DELTPENFDT TALLRAVDAV DVLRGDLNDS ADGAPPQLRT DLLKLHQLAM AAFNEGSRSR VAELFDLAVD LQDQVDHLMT SLEQVQETLS
R

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
HTH_37 HTH_37 Tn5501.12 336 2633-2968 -
Class:   Passenger Gene
Sub Class:   Antitoxin
Sequence Family:  HTH_37 (Pfam:PF13744)
Protein Sequence:  
MQKRIIEGVE VQRSSGNVFA DLGLPDAEKL KIKTGLVVEI RRAMRALGLT QQAAAKRMGI PQPKVSGMMR GDFTNLSERK LMDCLNRLGY DIEIKVRPAA
EPIGHLTLAT A

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
Gp49 Gp49 Tn5501.12 378 2949-3326 -
Class:   Passenger Gene
Sub Class:   Toxin
Target:   ribosome associated mRNA
Sequence Family:  Gp49 (Pfam:PF05973)
Protein Sequence:  
MTNKEKPLEW IASSHKDLMA LPSDVRRRFG YALSLAQIGD QDDAAKVLKG FGGAGVLEVV EDDAGGTYRA VYTVKFAEAV FVLHCFQKKS KSGIATPKAD
MDIIRARLKV AEVLAQELRN AKTNH

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpR TnpR Tn5501.12 579 3532-4110 +
Class:   Accessory Gene
Sub Class:   Resolvase
Transpoase Chemistry:   Serine
Sequence Family:  Serine Site-Specific Recombinase
Protein Sequence:  
MRVSSDSDRQ STNLQRDALL AVGVDARHLF EDHASGAKDD RAGLARALEF VRPGDVLVVW KLDRLGRSLS HLLAIVTSLK KKQVAFRSLT ENLDTTTPSG
EFLFQVFGAL AQYERALIQE RVVAGLAAAR KRGRIGGRPQ AITGEKLEAI VAALDGGMSK AAVCRNFGVK RTTLIETLAR VGWTGSRGAS SR

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpA TnpA Tn5501.12 3030 4107-7136 +
Class:   Transposase
Transpoase Chemistry:   DDE
Protein Sequence:  
MTTKSERLTV LSDAEQEALY GLPDFDDAQR LEYLALTETE LALASSRPGL HAQVYCILQI GYFKAKHAFF RFDWSEVEHD CAFVLSRYFH GESFEHKPIS
KHEHYTQREW IADLFGYRPW AAEFLAQLAQ QAAQTVRRDV MPGFIAAELI VWLNEHKIIR PGYTTLQELV SEALSAERRR LAGLLSEVLD ESAKAALGRL
LVRDDTLSQL AALKQDAKDF GWRQMARERE KRATLEPLHR IAKALLPKLG VSQQNLLYYA SLANFYTVHD LRNLKADQTY LYLLCYAWVR YRQLSDNLVD
AMAYHMKQLE DESSAGAKQS FVAEQVRRQQ DTPQVGRLLS LYIDDSVPDP TPFGDVRQRA YKIMPRDTLQ TTAQRMSVKP VSKLALHWQA VDGLAERIRR
HLRPLYVALD LAGTDPGSPW LVALAWAKDV FAKQQRLSQR PLAECPAATL PKRLRPYLLT FDADGKPTDL HADRYEFWLY RQVRKRFQSG ELYLDDSLQH
RHFSDELVSL DEKAAVLAQI DIPFLRQPLD AQLDALATEL RAQWLAFNRE LKQGKLTHLE YDKDTQKLTW RKPKGENQKA REKAFYEQLP FCDVADVFRF
VNGQCQFLSA LTPLQPRYAK KVADADSLMA VIIAQAMNHG NQVMARTSDI PYHVLESAYQ QYLRHATLHA ANDCISNAIA ALPIFPYYSF DLDALYGAVD
GQKFGVERPT VKARHSRKYF GRGKGVVAYT LLCNHVPLNG YLIGAHDYEA HHVFDIWYRN TSDIVPTAIT GDMHSVNKAN FAILHWFGLR FEPRFTDLGD
QLKELYSADD PALYDQCLIR PAGRIDRDLI VSEKPNLDQI VATLGLKEMT QGTLIRKLCT YTAPNPTRRA VFEFDKLIRS IYTLRYLRDP QLERNVHRSQ
NRIESYHQLR STIAQVGGKK ELTGRTDIEI EISNQCARLI ANAVIFYNSA ILSRLLMKYE ASGNAKAHAL LTQISPAAWR HILLNGHYTF QSDGKMIDLD
ALVAGLELG

 Internal Repeat Elements     

Name Associated Mobile Element Coordinates Sequence (Top Strand)
IRL Tn4662a 1-38 GGGGATGTAA GCCGGAACCC CAGAAATTTC CGTCACCC

 References     

Dößelmann B, Willmann M, Steglich M, Bunk B, Nübel U, Peter S, Neher RA, ORCID: 0000-0003-2525-1407. Rapid and Consistent Evolution of Colistin Resistance in Extensively Drug-Resistant Pseudomonas aeruginosa during Morbidostat Culture. Antimicrob Agents Chemother. 2017 Aug 24;61(9):e00043-17. doi: 10.1128/AAC.00043-17. Print 2017 Sep. PubMed ID: 28630206