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Transposon
Name: Tn5393.10
Family: Tn3        Group: Tn163
Evidence of Transposition: no
 Host     

Host Organism:Escherichia coli MDR_56 Molecular Source:plasmid unamed 6
Date of Isolation:2017

 Map     



 Terminal Inverted Repeats (IR)     

IRL (Length: 81 bp)GGGGTCGTTTGCGGGAGAGGGCGAAATCCTACGCTAAGGCTTTGGCCAACGATATTCTCCGGTAAGATTGATGTGTTCCCA
IRR (Length: 40 bp)GGGGTCGTTTGCGGGAGGGGGCGGAATCCTACGCTAAGGC

 Sequence     
DNA SequenceLength  13779 
--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGGGTCGTTT GCGGGAGAGG GCGAAATCCT ACGCTAAGGC TTTGGCCAAC GATATTCTCC GGTAAGATTG ATGTGTTCCC AGGGGATAGG AGAAGTCGCT 100
TGATATCTAG TATGACGTCT GTCGCACCTG CTTGATCGCG GCCGCGATAG CTAGATCGCG TTGCTCCTCT TCTCCATCCG CGTTCCAAGC TGCGGAAAGG 200
CACCCATAAG CGTACGCCTG GTCGAGCAGG CGACGCGGAT CGACGTCCAG CGCACGAGAG AATGCGTCCG CCATCTGTGC AATGCGTCTA GGATCGAGAC 300
AAAGGTCGTC TCTGTCAGCC GGATCGTAGA ACATATTGGC GGCGCCAAAG CCCACTTCAC CGACCAGACC GACGGGATCT ATCACCAGCC AGCCGCGACT 400
GGAGAACATG ATGTTTTCAT GATGCAGATC GCCATGTAGC CCACGCAGTT CCGAGGCATT GCTCATCATT TGATCGGCTA TAATCGCCGC GTGGACGTAG 500
TCAGTTTGAC AACCTGCGTT TTGATCATCG CGCGCCCGCT GAAACAAAGC TGCAAAGCGA TCCCGGATCG GGAGAAGGGC AGAAGGCAGG GGTTCCTCAG 600
ATGCGGCATA CAGCTTCGCC ATTAGTTCCG CTGCAATTTC GGTCGCCTGG TAGTCGCCGT GCTCGGCAAC GATGTGAGAG AGCATTCGCT CCCCGGCATA 700
TTCGAGCAAC ATCAGATTGT TCTCACGACC GAGCAACCGG ACTGCTCCCC TCCCATTGCG CCATACCAGA TAGTCGGCCC CGCGCAGTTC ATCAGCAATG 800
TCTTCTATAG GTTTCAATTC CTTGACGATT GCAGGAGTCC CGTCTGGCAA TGAAACTTTC CAAACGAGGC TGGAAAAGGT GTCCGCAATG AGAACAGGTT 900
GCGAAACGTG CCAATGAGCA GGAAAAACAG GCGGCATGAA CATCAACCCC AAGTCAGAGG GTCCAATCGC AGATAGAAGG CAAGGCGTTC GCGGTCGGGG 1000
GCTTCGATCC CCAATACATT GAATAGGACA GCGAAGGCGC GCTCTGCTTC ATCTGGCGCT GCCCAGTTCT CTTCGGCGTT AGCAATCATG AGTGCCAAAT 1100
CGGCATAGCG ATCTGCTGTT CCGAGCCGCC CAAGGTCGAT CAGACCCGTG CATTGAAGAG TTTTAGGGTC CACCATGAAG TTCGGCATGC AGGGATCACC 1200
ATGGCAAACA ACCATATCGG TGCGCTCTTG GTCGAGCCGC ACCGGTAGCT CTCGTTCGAC ACGAGCCAAA AGATCGAGCT GCGGCGTACT CTTGTCCTCG 1300
TCCGGTAAGA AGTCGGGATT GACGGCATTG CGGGACACCA CATCAACGGC GCGTCCGAAC ATTCGCGACA GCCTGCGCTC AAACGGACAT TGATCAACCG 1400
ATAGGCTGTG AACAGCGCCA AGTTGCTGCC CCATTGACGG CCACGCTTTG AGCAAATCCG CTCCAGACAG ATCAGCCGCC GGTACTCCCG GAATTGCCGT 1500
TATCACCAAG CATGCACCCT CCTGTTCCTC CTGCCAGTTG ATCACCTCGG GGCAAGCCAC ACCTCGACCT TTGAGCCAAA TGAGGCGGTC ACGCTCTCCA 1600
GCGAGCTCAC CGCGGCGGGA AGCAGGTGCG ATTTTCGCGA AGGCATGCCC GTCACCACGT CGAAAAACAA AATCACCAGA TTCTCCGCCT CTGACAGGCA 1700
ACCAGTCAGA ATGCGATTTA CCAAAAAAAA TATTAGTTCG ATTCAATGGA GGTTCCTTCA GTTTTCTGAT GAAGCGCGGA GGTGGCTCAA CCTGCGAAAA 1800
GAAACGAGTT GCTATGGACT TGCACCGGTT GTGTTCCGGT CTATCTCTCA TTTTAAGCGG CTTTTTTCTC AAATGCCACC GGCGATTTCC AGCCGAGTGT 1900
TGAATGTCTT CGGCGTGGAT TATAAAAGCC ATTTATATAT TCGAAGATTG CAATCTCAAT ATCTCGCCTT GTTTGCCAGT GTCTGCGCCA AATCAACTCA 2000
GCCTTTAATG ATTTAAAGAA GCTTTCTACT GCGGAGTTAT CAAAACAATT GCCTTTCCCG CTCATGGACG GCAGCAATTG ATGTTTGAGC AGTAGCTTTT 2100
GATATTCATG AGCGCAATAT TGGCTCCCAC GGTCTGTGTG TTGAATACAA CCCGGTGGTG GTTTGCGTAA AGCCAACGCC ATATTCAGTG CCCTTAATGC 2200
AAGATCCTGC TTTAATCGAT CACCTGTTGC CCAGCCAATC ACGCGACGGG AATACAGGTC AAGGATAACA GCAAGATAGA CCCATCCTTC TCTGGTCCAA 2300
ACATAAGTGA TATCGCCTGC CCATTTCTGG TTGGGTGCGC TTGCGCTAAA GTCTTGTTTT AATAGGTTCG GTGCAATGTT GAAGGTATGA TGACTATCCG 2400
TTGTCCGTTT GAATTTACGC GTTCGAACAA CTGTAATGTT ATTCTGGCGC ATCAAACGTC CAACCCGACG CTGCCCAACC TGCAGGCCCA GCGCTTTCAA 2500
CTCTTCTGTC ATACGCGGCC TACCATAGCT CCCCAAACAC AACCGATGCT GCTCACGTAT ATGCGCTAGA AGTATAAGAT CACGACGCTG GCGCAGTGAT 2600
GGAGGACGGC GTTTCCATGC ACGTAAACCA CGATCTGTTA CGCCCATCAA ACGACATATG CGTGAACGTG AGAGAGAGCC ACGGTAATCC GTAATAAACT 2700
GAAATCTCAC AGCTTTTGTA CTGCGAAAAA TATTGCTGCC TTTTTTAATA TCTCCCTCTC CTCCCGAAGG ATACGGTTCT CTTTGCGTAA ACGTTCATTC 2800
TCACGCAGAA GATCAGTGTC TTGGGTAGGA ATTTTAGTTT CATCGGAAAT TGATGCGATC CATTTCCCAA GCGTGGAAAG CCCAATACTT AAATCTGACG 2900
CAACTTGACG GCGTGTTAAG CCACTAGTGA GTGCTATGCG AACTGCATCA CGCTTAAATT CATCACTATG CTTTAATGAC ATATATGGTC TCCTTGATAA 3000
CAAATAATGC TCTCAAAAAG ACCGGAACGA AACCGAGGCA AGTCCACTAC GTAAGTCCGA GAACATGCTT TCCATGGTCT CTGAGCTCGC CTTTGGGACC 3100
GACATATCGG TAGAGAGTGA CGCGCTCGAT GCCGAGTTCC TTGCAGAGAT CGGAAACTGA AGTATCGCGC TGGGCCATGG CGGCTTGCGC GAGACGCACC 3200
TGAGCTTTGG TGAGCGCGAA TTTTCGTCCG CCCTTGCGAC CGCGCGCTCT CGCGGAGGCG AGACCCGCCA TGGTGCGCTC TCGGATCAGA TCCCGCTCGA 3300
ACTCGGCCAA GGTGGCGAAG ATTCCGAACA CCATGCGACC GGACGCAGTC GTGGTGTCGA TCTGAGCGCC CTTTCCAGTC AGAACCCGCA GGCCGATCTT 3400
GCGGTCTGAC AGCTCCTTCA CCGTGTTGAC CAGATGGGCA AGCGATCGTC CGAGGCGATC GAGCTTCCAG ACCACCAGCA CATCGCCGTC ACGCAATGAC 3500
TTGAGGCAGG CAGTCAAGCC AGGGCGATCA TCACGACCGC CGGAAGCAAG ATCATCATAG ATATTGTCCC GTTCGACACC TGCGGCGCGC AAGGCGTCGT 3600
GCTGCAGGTC GAGAGACTGC GAGCCATCGG CTTTGGAGAC GCGGGCATAT CCGATCAGCA TGTATCACAA ACGTTGGTTT GAGGCGGCGC TTCGGCCACG 3700
ATTGCATTGA CCTCTGGAAA TGTATCTCAA CCAGCTTCAT AAACAAAGCG TCTTGAACGC TATCAGATTT TGAAAAAGGA ACATGTATGC CGCGTCGCGT 3800
CACTCTAACC GATCGGCAGA AAGACGCGCT GTTGCGCTTG CCGACTTCAC AGACGGATTT GCTCAAGCAC TATACGCTGA GTGATGAAGA CCTTGGGCAT 3900
ATCAGGCTGC GTCGGCGCGC TCACAACAGG TTCGGCTTCG CCCTGCAATT GTGTGTCCTG CGCTATCCCG GCCGGGTGCT GGCTCCAGGC GAACTGATCC 4000
CTGCAGAGGT CATCGAATTT ATCGGAGCGC AGCTTGGCCT GGGTGCCGAC GATCTCGTAG ACTATGCTGC CCGCGAGGAA ACACGGCACG AGCATCTTGC 4100
CGAGTTACGG GGGCTCTACG GCTTCCGCAC CTTCTCCGGA CGTGGTGCGA CTTCTTATCA ATAGTTAAGT GTAAAAAGTA TTATAAAATC AATTATTTCA 4200
CTTTGACTAC ATGTCTTTAA AGAGACCACC ATATTTGATG ATTAACTCAA AAACACATAA CCCCGTTCTG GTTTTAGAAC GAGGTTATGT GTTTTTTAAT 4300
TGAAATACTT CACTGCACTA AAAAGTGCTA ACAATCGAGT TAATTAAATC CAAGTATTAT TGCATAATCG CACCCTATAA TGGAGTAACT AAAATATGAT 4400
TTCAATCATA AAATCAATAA ATTTTATCTG TCACTATAGC ACCCGTTACT TCAATAACAA ATCGCTGAAA AAAGACGTTA ATCCTTGTAG AATCAACGCC 4500
TGTGCAGTAA ATAAAAAAAC TTAAATACTA TTTTTGTTTT ACCCAGTCAC TTTCGGCAGT TGAAATTGGT TTCTTTGTAT CAGCGTTAAA TAAAGCATAT 4600
TTATAAGAAA CCTTATTACC CGTGTCTTTT AATGAAAAGA AAAAATATAC AAGACCTTCA GAATTTATAT CCTTTGCATC AGAGACTACT TCTTCTTTTA 4700
ATCGTTGCTT TCCTTTTTCA TCACCCCAAC TGATTGTATC AATTAAATCA GGGAGTTTCC TTACAATCAC TAATTCTCGA ACTTTCGTTT TTGAGTCACT 4800
GTATTCCTCA TATTCTTTTT TATCAACCGT GTTTTTGTAA AACTGATTAA CATCCTCATA ATTTTGATTC GCTAAAGCTG ACTGTCCTAA AGTAAATAGA 4900
GTTAACAAAA AAATAGCTCC TAAAACAATT TTTCGAAATA TAAACATGGA AACACCTCCA GAATTTTTAG TAGTATTCCC GTAGAATAAA TTTTTATATA 5000
TAGGGGAGAA GAAAAAAGAA CTAATCGAGT CCATAGTATA AGAAAAGAGC CGCCACTTAT GACAGCTCTG ATTTTGAACT CTTGCCCCTG ATAGTTAAAT 5100
ATAAAATACT TATACTTCTT GTTTCACTGG AACAATTTTT AAAAACTTTC GGTAAAGGTA AAGGGCAAGA AATGCAGGGA TAATACTTAA TCCCATATAT 5200
AAGTAAGCAT ATTTATTCAA CTCTTCTGTG GTTGTAACTT TTACAATATT CCCCATAAAC TTTACATACA ACCATTGACC AACCTGTGAA TTATAATATC 5300
CGTAACCACT TCCAAAAAGG GAAATAGACC ATACAGCAAG ACAACCAGCA ACTCCTAAAC AAATCCATCC TTTTCTATTC ATTTTAGCAC CTCCTTGTAT 5400
TCTTAAATAA GATTATTCTT TAAGACAAAA CCATTATCCT GCTAATTAAA TAAACCTTCC AAATAGTGGA ATAAGCGTCC CTGTCTTATT GCAGAAACGC 5500
ACCCAATAGT TTAAGTAGAA TCCTTCACAA TCTTTTCTAC ACCTAATATA ACTCCAATCC ATTAATGCGT TGCTCCAGAA ACTGATTGAT TAGAAAAAGA 5600
CGCCTTCTTA TTAAAGAAAG GCGTCCGATT ATTGAAGTAA AAAACTTAAT CAAAATGGAC TCTTTGTTAC TTTTCTCATT TTAAATTAAA TCAAAAAATA 5700
ATTATTCTCC TTTTATACCC TAGTCATCTC TTCATATCTC TTCTTTATCT TTTCAATTTT TCTAGGATTT GTTTCATTTT CCATAAGAAG TTTTGCTTGA 5800
CTTAACTGGA TTTGTTCAAT TTCCTGTTGG AGCTGTTCAA TATTTGCATC CGTTTTATTC TTGAATTCCT CTAGATTTCC ACGATAACCT TGTAGCTTTT 5900
TATTATCAAT GATGAATAGT TCCGTACTCA GTTCATTAAT GAACGCCTCA TCATGGCTGG CAAATATTAT TGTTCCTTCA TATTCTTTTA ATACACTTTT 6000
TACGACTTCA ATTGATGGTA AATCCAAATA GTTTGTAGGT TCATCTAAAA TAAGCAAATT ATAATCTGAT ACAATCAACT TTGCAAAAGA TAACCTAATT 6100
TTTTCGCCAC CGCTTAATAC TGCAACCTTT TTATCAAAAT CCTCAATCGT AAACAGTAAA TTCATTAATA CTGTATAAAC AGTATGATTT TCTTGTACAC 6200
TGTCAGACAA GACAGACTCC AGTAAAGTTT TATCTGGCTG CAAATTTTCA AACTCTTGGT ACAGATAACC AATTTTTAAT TTCGGTACAG CATAGATCCC 6300
TTCATACTTA TTTCTGATTA AAGAAAAAAG AGTAGATTTA CCACTTCCAT TATCCCCCAA TACAGCAACT TTTTGTTTGT TTCGGATTTC AAAAGAGGCA 6400
TGATTAAAAA TCAAATGATT ATCATATCCA AAAGTTACTT CTTCACCACG AATTAATATT TTATTTTTCG GGGGATTTGT TAGCTCAAAA TTAATTCGAA 6500
TATTTGCCTG TTCTTCGACT TGTTCTTTTA CATCTAACTG CTCTATTCGT GATTGCACGG CTTTTGCTTG CTTTGCTATT GCTTTTTGTC GCCCTCCAAA 6600
AGACTTGTAA GTAGATATGA AACTTCTAGC TCTAATTTCA GAATTACTCA TATTCCTTGG CTTATCTGTT ATCGCTTCAG CTTGCCTTTT TTTCTGCAAA 6700
TAAGCTTCCT CTAGTTGCTT TTTCTTTGCT TGATAATTTT CATATTCTCT TTTCTCAGTG TGAATTTGAT GTTCCTTCTG CTGTTTATAT GCAGTATAAT 6800
TCCCGTCAAA ACAGTTAATG GTATTGTTGT CAATCTCAAT AATTCGATTA CACAATTCAT CTAATAAATT TGTATCGTGG CTAATAATCA TCATTGTGTT 6900
ATATTTTCCT AAATTTCGCT TTAGCAATTG AATCCCTTTA GTATCTAAAT TCGCTGTTGG TTCATCTAGT AAAAGTATTG AACTACTCTT AGAAAAAGTC 7000
TCAGCTAAAC GTAAACGAGT TTTTTCCCCA CCACTGAACC AACCTTCAGA TATTGTTGAG CTGGAGCGAA ATTCTTTCAA TTGCCAAGAA TCTACTGATT 7100
CGTGGTATTG ACCGAATTGT TTATAATAAG AGATATCTCC CTTAACCTCA ACATTTCCCT TGTCAGGAGC TATATCATTG TTAATGATCT CCAACAACGT 7200
CGTTTTTCCA CTTCCGTTTA ACCCGACTAC ACCAATAATA TCGTTCTTAA AAACAGTTAA TTTATCAAAA GTAAAAAGAA GCTTGCCTCC AAAATATTTT 7300
TCTATTCCTC TCATTTTTAT CAATTCCATA CAATCGCCTC CCTTTCTAGC GATTAAGTTA ATAAACATAT TAAATCATTA ATTAGTTTTT GTAGTTTAGA 7400
GAGTTTATTT CTTAGGGTTT CTATTCCTCA ATTATTCCGT ATCCTTCTGG TGCAGGAATC CCATGTTCCG AAGAACGACT GACTGATTCC CACTCTTTCC 7500
ATGTAAATAT ACGTTTTTCT GCATTTTCAA CAGCTAAATC ATATACAAGG CTTCCCAGAA CTAATCGGAG AGGCGGATTC TCACTATTAA CCAGTTTCAT 7600
TATAGCTTCG GCGGCTAACT TAGGATCACT ATCCACCGAT TCGTTTGAAT ATTGTTGGGC CAACTTTTCA CGTAATGAAT CATACTCTTT TTTCTGTGTA 7700
GTAAAACTCA TTTTTAAGTA TAGATTCGTC CAGTAACCTC CAGGTTCTAC GATAGATACT TTTATACCAA AATGTGCAGC TTCTTGTGCT AAAGCCTCGC 7800
TAAATCCTTC TAAAGCAAAT TTACTAGCGC TATAGATTCC CGACATTGGA CCACTAATCA GTCCACCAAT ACTAGATATC TGGATAATAT GACCTGATTC 7900
TTGTGCCCGC AAGTACGGCA TAACAGCTTG ACTTACCCAT ACTGTACCGA AGAAATTAGT TTCCATTTGG CTTCTAACTT CATCTTCACT AAATTCTTCA 8000
ATCATTCCCA TTACCATATT CCCTGCATTG TTAATGACAA TATCGAGTCT TCCAAAATGT TTAATGGCAG TTTCCACTGT AGTCGAAACA GCACTTCTAT 8100
CAGTAACATC AAGACTTAAA GGAAGTAACA TTCCTTCAAA CTGGCATTTT AACTCATTCA GTTTTTCAAT ATTTCTAGCA ACACCAACAA CCTTCTCTCC 8200
TGACTCCAAT GCTTTTTTTG TGAATTCGTA TCCTAGTCCA CTGCTTGCAC CTGTAATAAA CCACACACGT GTATTTTCAT TGTTATTAAA TGTCATAAAT 8300
AATCTCCTCC ATTAATCATG TAATATTGGT ATCATTCAAT ACCAATTTAA AACAAACAAA ATAAAGAGCA CAGGCAATCT GCCTATGCTC TAAATATAGA 8400
AATATAAAAT TTCAACAGGA TTAATCCGAT TGTTGGTATC ACAAATAAGC CATCAAATTC ATTGATGTAC CCTTTTCTAC GAAGTGTCAT GGGAGATCTC 8500
CCTTTAAAAT AAAAAAGAGG AAGATTCCTC TCCCCCTTTT TACTATAACC GTATAATAAA GGTTTCCTAT AAGAAGACAG ATTTATCCTA ATACTCTGAG 8600
CATAAGCAGA GTCGAAGGTG CGCTCGCCGA GCAGTCCGTG CGGGTCGATG GCCAGCCAGC CGCGGTCGCC GAAGTCGAGC ACGTTCTCGT GGTGCAGGTC 8700
GCCGTGGAGC GGGCACACCT CGCGCGGCGC CGCCAGAAGT TGGCGCGCTA CGCTGGCGGC GGGCGCAAGT GCCGCGTGCT CAGCGGCCAA CCGGAAAAGC 8800
GGCTGGAACC ATTCCTGTAG CGGATGGAGA TCGGGCGGCG GTCCGGACCG CGGCGCGTGC AGACGAGCGG CGGTGTCGCA GAGGATCCTG CAAGCCTCGT 8900
CGTCCTGGCC GGACCACGCT ATCTGTGCAA GGTCCCCGGC CCCGGACGCG CGCTCCATGA GCAGAGCGCC CGCCGCCGAG GCGAAGACTC GGGCGGCGCC 9000
CTGCCCGTCC CACCAGGTCA ACAGGCGGTA ACCGGCCTCT TCATCGGGAA TGCGCGCGAC CTTCAGCATC GCCGGCATGT CCCCCTGGCG GACGGGAAGT 9100
ATCCAGCTCG AGTGGGTGGT GAGCAGCTCG CCGTCGCGCA GCAGGCGCCA GCGCTCCATC CACGCAGTGA CCTCAGGCGG AAAACGGGAA GACACACTCA 9200
TGAGATGCCT GCAAGCAATT CGTTCTGTAT CAGGCGCAGG AGCGTCCCGT CCGGGTCGAC CAAAGCGGCC ATCGTGCCTC CCCACTCCTG CAGTTCGGGG 9300
GCATGGATGC GCGGATAGCC GCTGCTGGTT TCCTGGATGC CGACGGATTT GCACTGCCGC TAGAACTCCG CGAGGTCGTC CAGCCTCAGG CAGCAGCTGA 9400
ACCAACTCGC GAGGGGATCG AGCCCGGGGT GGGCGAAGAA CTCCAGCATG AGATCCCCGC GCTGGAGGAT CATCCAGCCG GCGTCCCGGA AAACGATTCC 9500
GAAGCCCAAC CTTTCATAGA AGGCGGCGGT GGAATCGAAA TCTCGTGATG GCAGGTTGGG CGTCGCTTGG TCGGTCATTT CGAACCCCAG AGTCCCGCTC 9600
AGAAGAACTC GTCAAGAAGG CGATAGAAGG CGATGCGCTG CGAATCGGGA GCGGCGATAC CGTAAAGCAC GAGGAAGCGG TCAGCCCATT CGCCGCCAAG 9700
CTCTTCAGCA ATATCACGGG TAGCCAACGC TATGTCCTGA TAGCGGTCCG CCACACCCAG CCGGCCACAG TCGATGAATC CAGAAAAGCG GCCATTTTCC 9800
ACCATGATAT TCGGCAAGCA GGCATCGCCA TGGGTCACGA CGAGATCCTC GCCGTCGGGC ATGCGCGCCT TGAGCCTGGC GAACAGTTCG GCTGGCGCGA 9900
GCCCCTGATG CTCTTCGTCC AGATCATCCT GATCGACAAG ACCGGCTTCC ATCCGAGTAC GTGCTCGCTC GATGCGATGT TTCGCTTGGT GGTCGAATGG 10000
GCAGGTAGCC GGATCAAGCG TATGCAGCCG CCGCATTGCA TCAGCCATGA TGGATACTTT CTCGGCAGGA GCAAGGTGAG ATGACAGGAG ATCCTGCCCC 10100
GGCACTTCGC CCAATAGCAG CCAGTCCCTT CCCGCTTCAG TGACAACGTC GAGCACAGCT GCGCAAGGAA CGCCCGTCGT GGCCAGCCAC GATAGCCGCG 10200
CTGCCTCGTC CTGCAGTTCA TTCAGGGCAC CGGACAGGTC GGTCTTGACA AAAAGAACCG GGCGCCCCTG CGCTGACAGC CGGAACACGG CGGCATCAGA 10300
GCAGCCGATT GTCTGTTGTG CCCAGTCATA GCCGAATAGC CTCTCCACCC AAGCGGCCGG AGAACCTGCG TGCAATCCAT CTTGTTCAAT CATGCGAAAC 10400
GATCCTCATC CTGTCTCTTG ATCAGATCTT GATCCCCTGC GCCATCAGAT CCTTGGCGGC AAGAAAGCCA TCCAGTTTAC TTTGCAGGGC TTCCCAACCT 10500
TACCAGAGGG CGCCCCAGCT GGCAATTCCG GTTCGCTTGC TGTCCATAAA ACCGCCCAGT CTAGCTATCG CCATGTAAGC CCACTGCAAG CTACCTGCTT 10600
TCTCTTTGCG CTTGCGTTTT CCCTTGTCCA GATAGCCCAG TAGCTGACAT TCATCCGGGG TCAGCACCGT TTCTGCGGAC TGGCTTTCTA CGTGTTCCGC 10700
TTCCTTTAGC AGCCCTTGCG CCCTGAGTGC TTGCGGCAGC GTGAAGCTTT CTCTGAGCTG TAACAGCCTG ACCGCAACAA ACGAGAGGAT CGAGACCATC 10800
CGCTCCAGAT TATCCGGCTC CTCCATGCGT TGCCTCTCGG CTCCTGCTCC GGTTTTCCAT GCCTTATGGA ACTCCTCGAT CCGCCAGCGA TGGGTATAAA 10900
TGTCGATGAC GCGCAAGGCT TGGGCTAGCG ACTCGACCGG TTCGCTGGTC AGCAACAACC ATTTCAACGG GGTCTCACCC TTGGGCGGGT TAATCTCCTC 11000
GGCCAGCACC GCGTTGAGCG TGATATTCCC CTGTTTTAGC GTGATGCGCC CACTGCGCAG GCTCAAGCTC GCCTTGCGGG CTGGTCGATT TTTACGTTTA 11100
CCGCGTTTAT CCACCACGCC CTTTTGCGGA ATGCTGATCT GATAGCCACC CAACTCCGGT TGGTTCTTCA GATGGTCGTA CAGATACAAC CCAGACTCTA 11200
CGTCCTTGCG TGGGTGCTTG GAGCGCACCA CGAAGCGCTC GTTATGCGCC AGTTTGTCCT GCAGATAAGC ATGAATATCG GCTTCGCGGT CACAGACCGC 11300
AATCACGTTG CTCATCATGC TGCCCATGCG TAACCGGCTA GTTGCGGCCG CTGCCAGCCA TTTGCCACTC TCCTTTTCAT CCGCATCGGC AGGGTCATCC 11400
GGGCGCATCC ACCACTCCTG ATGCAGTAAT CCTACGGTGC GGAATGTGGT GGCCTCGAGC AAGAGAACGG AGTGAACCCA CCATCCGCGG GATTTATCCT 11500
GAATAGAGCC CAGCTTGCCA AGCTCTTCGG CGACCTGGTG GCGATAACTC AAAGAGGTGG TGTCCTCAAT GGCCAGCAGT TCGGGAAACT CCTGAGCCAA 11600
CTTGACTGTT TGCATGGCGC CAGCCTTTCT GATCGCCTCG GCAGAAACGT TGGGATTGCG GATAAATCGG TAAGCGCCTT CCTGCATGGC TTCACTACCC 11700
TCTGATGAGA TGGTTATTGA TTTACCAGAA TATTTTGCCA ATTGGGCGGC GACGTTAACC AAGCGGGCAG TACGGCGAGG ATCACCCAGC GCCGCCGAAG 11800
AGAACACAGA TTTAGCCCAG TCGGCCGCAC GATGAAGAGC AGAAGTTATC ATGAACGTTA CCATGTTAGG AGGTCACATG GAAGATCAGA TCCTGGAAAA 11900
CGGGAAAGGT TCCGTTCAGG ACGCTACTTG TGTATAAGAG TCAGCCCTTG TTGCAATGGC AACCAGGCTG ACCGCCACCA TGGCCGACGA TCCGCTCAAT 12000
CATGTGCTCG ACGGTTATCA CCGCTTCCGC CGATACGCTC CACGCATGTT GCGCCTGCTC GATCTGCGAG CTGCGCCCGT TGCACTGCCG CTTCTGGAAG 12100
CGGTGACGGC CCTTCGTACC GGTTTGAACG ATGCCGCGAT GACCAGCTTC TTGCGGCCCA GCTCGAAATG GCATCGCCAC CTTCGGGCCC AGAGGGCTGG 12200
CGACGCTCGC CTATGGGAGA TCGCGGTGCT GTTCCATCTG CGCGATGCGT TCCGCTCCGG AGATGTCTGG CTTACTAGGT CCCGGCGCTA TGGCGATCTG 12300
AAACACGCAC TCGTTCCGGC ACAATCCATC GCGGAAGGCG GTCGTCTCGC TGTGCCATTG CGGCCGGAGG AATGGCTGGC AGACCGGCAA GCTCGCCTCG 12400
ACATGCGGTT GCGCGAGCTT GGCCGTGCCG CTCGCGCAGG CACGATCCCG GGCGGGTCGA TTGAAAACGG CGTTCTGCAT ATCGAGAAAC TCGAAGCCGC 12500
CGCGCCGACA GGCGCCGAAG ATCTGGTGCT CGATCTCTAC AAGCAGATCC CGCCCACGCG CATCACCGAT CTCCTGCTGG AGGTGGATGC GGCGACCGGC 12600
TTCACCGAAG CGTTCACCCA TCTGCGCACA GGAGCACCCT GCGCTGACCG GATCGGGCTA ATGAACGTTA TCTTGGCGGA AGGGATCAAC CTCGGCTTGC 12700
GCAAAATGGC GGATGCGACA AACACCCACA CCTTCTGGGA ATTGATCCGC ATTGGACGGT GGCATGTCGA GGGCGAAGCC TATGACCGGG CGCTGGCCAT 12800
GGTGGTCGAG GCACAGGCAG CGTTACCCAT GGCCCGGTTC TGGGGCATGG GCACGTCGGC TTCGAGCGAC GGACAGTTCT TCGTCGCTAC AGAGCAAGGT 12900
GAGGCCATGA ACCTGGTCAA CGCGAAATAT GGCAATACCC CGGGCCTGAA AGCCTATAGC CACGTCTCCG ACCAATATGC GCCGTTCGCA ACCCAGGTGA 13000
TTCCTGCAAC GGCAAGCGAA GCGCCTTACA TCCTCGATGG CCTGCTGATG AACGATGCTG GACGCCATAT CCGCGAGCAG TTCACCGACA CGGGCGGCTT 13100
CACCGATCAC GTCTTTGCCG CATGTGCCAT TCTCGGCTAC CGGTTCGCTC CGCGCATCCG CGACCTGCCA TCCAAACGGC TCTACGCGTT CAATCCGTCG 13200
GCCGCCCCGG CGCACCTGCG AGCGTTGATC GGCGGAAAGG TCAACCAAGC CATGATCGAG CGCAATTGGC CCGACATCCT GCGCATCGCC GCCACCATTG 13300
CTGCCGGGAC CGTCGCGCCA AGCCAGATTC TGCGGAAACT CGCCTCCTAT CCGCGGCAGA ACGAGCTCGC GACAGCCCTG CGGGAAGTCG GTCGCGTCGA 13400
GCGCACCCTG TTCATGATCG ACTGGATTCT GGATGCCGAA CTCCAACGGC GTGCCCAGAT CGGGCTCAAC AAAGGCGAAG CTCATCATGC GCTGAAGCGG 13500
GCAATCAGCT TCCACCGCCG CGGTGAAATC CGCGACCGTT CCGCCGAAGG CCAGCATTAC CGCATCGCCG GCATGAATCT GCTCGCCGCC ATCATCATCT 13600
TCTGGAACAC CATGAAGCTC GGCGAGGTCG TTGCAAACCA GAAACGCGAT GGAAAGCTGC TATCGCCCGA TCTCTTGGCC CATGTTTCGC CGCTCGGATG 13700
GGAACACATC AATCTCACCG GAGAATATCG CTGGCCAAAG CCTTAGCGTA GGATTCCGCC CCCTCCCGCA AACGACCCC

 Recombination Sites     

Name Coordinates Gene Sequence
res 3565-3786 222 TGTCCCGTTC GACACCTGCG GCGCGCAAGG CGTCGTGCTG CAGGTCGAGA GACTGCGAGC
CATCGGCTTT GGAGACGCGG GCATATCCGA TCAGCATGTA TCACAAACGT TGGTTTGAGG
CGGCGCTTCG GCCACGATTG CATTGACCTC TGGAAATGTA TCTCAACCAG CTTCATAAAC
AAAGCGTCTT GAACGCTATC AGATTTTGAA AAAGGAACAT GT

 ORFs     
ORF Summary
Gene Name Associated TE Coordinates Class Sub Class Orientation
APH(6)-Id (ARO:3002660) Tn5393.10 107-952 Passenger Gene Antibiotic Resistance -
APH(3'')-Ib (ARO:3002639) Tn5393.10 943-1746 Passenger Gene Antibiotic Resistance -
orfAB IS1133 1853-2982 Transposase   -
orfB IS1133 1853-2710 Transposase   -
orfA IS1133 2707-2982 Accessory Gene Regulator -
tnpR Tn5393.10 3050-3661 Accessory Gene Resolvase -
tnpA N-ter Tn5393.10 3787-4149 Transposase   +
ABC-F Tn5393.10 5713-7368 Passenger Gene Other -
NAD(P)-dependent oxidoreductase Tn5393.10 7421-8296 Passenger Gene Other -
BRP(MBL) (ARO:3001205) Tn50_p 9198-9578 Passenger Gene Antibiotic Resistance -
APH(3')-IIa (ARO:3002644) Tn50_p 9599-10393 Passenger Gene Antibiotic Resistance -
tnp_truncated IS50L 10500-11852 Transposase   -
inh_truncated IS50L 10500-11687 Accessory Gene Inhibitor -
tnpA C-ter Tn5393.10 11947-13746 Transposase   +

ORF Details
Gene Name Protein Name Associated TE Gene Length Coordinates Strand
APH(6)-Id (ARO:3002660) APH(6)-Id Tn5393.10 846 107-952 -
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Target:   aminoglycoside antibiotic (ARO:0000016)
Sequence Family:  APH(6) (ARO:3000151)
Comment:   strB, orfI || strict match to reference sequence for ARO:3002660 (bitscore: 568)
Protein Sequence:  
 MGLMFMPPVF PAHWHVSQPV LIADTFSSLV WKVSLPDGTP AIVKELKPIE DIADELRGAD YLVWRNGRGA VRLLGRENNL MLLEYAGERM LSHIVAEHGD
YQATEIAAEL MAKLYAASEE PLPSALLPIR DRFAALFQRA RDDQNAGCQT DYVHAAIIAD QMMSNASELR GLHGDLHHEN IMFSSRGWLV IDPVGLVGEV
GFGAANMFYD PADRDDLCLD PRRIAQMADA FSRALDVDPR RLLDQAYAYG CLSAAWNADG EEEQRDLAIA AAIKQVRQTS Y

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
APH(3'')-Ib (ARO:3002639) APH(3'')-Ib Tn5393.10 804 943-1746 -
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Target:   aminoglycoside antibiotic (ARO:0000016)
Sequence Family:  APH(3'') (ARO:3000127)
Comment:   strA, orfH || perfect match to reference sequence for ARO: 3002639
Protein Sequence:  
 MNRTNIFFGK SHSDWLPVRG GESGDFVFRR GDGHAFAKIA PASRRGELAG ERDRLIWLKG RGVACPEVIN WQEEQEGACL VITAIPGVPA ADLSGADLLK
AWPSMGQQLG AVHSLSVDQC PFERRLSRMF GRAVDVVSRN AVNPDFLPDE DKSTPQLDLL ARVERELPVR LDQERTDMVV CHGDPCMPNF MVDPKTLQCT
GLIDLGRLGT ADRYADLALM IANAEENWAA PDEAERAFAV LFNVLGIEAP DRERLAFYLR LDPLTWG

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
orfAB OrfAB IS1133 1130 1853-2982 -
Class:   Transposase
Transpoase Chemistry:   DDE
Comment:   fusion protein from -1 programmed frameshifting between orfA and orfB
Protein Sequence:  
 MSLKHSDEFK RDAVRIALTS GLTRRQVASD LSIGLSTLGK WIASISDETK IPTQDTDLLR ENERLRKENR ILREEREILK KAAIFFAVQK L*DFSLLRIT
VALSHVHAYV V*WA*QIVVY VHGNAVLHHC ASVVILYF*R IYVSSIGCVW GAMVGRV*QK S*KRWACRLG SVGLDV*CAR ITLQLFERVN SNGQRIVIIP
STLHRTY*NK TLAQAHPTRN GQAISLMFGP EKDGSILLLS LTCIPVA*LA GQQVID*SRI LH*GH*IWRW LYANHHRVVF NTQTVGANIA LMNIKSYCSN
INCCRP*AGK AIVLITPQ*K ASLNH*RLS* FGADTGKQGE ILRLQSSNI* MAFIIHAEDI QHSAGNRRWH LRKKPL

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
orfB OrfB IS1133 858 1853-2710 -
Class:   Transposase
Function:   Nucleic acid binding (GO:0003676)
Transpoase Chemistry:   DDE
Comment:   frameshift required| 5'-end of tnp gene
Protein Sequence:  
 MRFQFITDYR GSLSRSRICR LMGVTDRGLR AWKRRPPSLR QRRDLILLAH IREQHRLCLG SYGRPRMTEE LKALGLQVGQ RRVGRLMRQN NITVVRTRKF
KRTTDSHHTF NIAPNLLKQD FSASAPNQKW AGDITYVWTR EGWVYLAVIL DLYSRRVIGW ATGDRLKQDL ALRALNMALA LRKPPPGCIQ HTDRGSQYCA
HEYQKLLLKH QLLPSMSGKG NCFDNSAVES FFKSLKAELI WRRHWQTRRD IEIAIFEYIN GFYNPRRRHS TLGWKSPVAF EKKAA

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
orfA OrfA IS1133 276 2707-2982 -
Class:   Accessory Gene
Sub Class:   Regulator
Function:   transposase activity (GO:0004803)
Comment:   orfA, together with orfB, encodes a fusion protein formed by translational frame-shifting that is the transposase for IS1133
Protein Sequence:  
 MSLKHSDEFK RDAVRIALTS GLTRRQVASD LSIGLSTLGK WIASISDETK IPTQDTDLLR ENERLRKENR ILREEREILK KAAIFFAVQK L

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpR TnpR Tn5393.10 612 3050-3661 -
Class:   Accessory Gene
Sub Class:   Resolvase
Function:   recombinaseactivity (GO:0000150)
Transpoase Chemistry:   Serine
Sequence Family:  Serine Site-Specific Recombinase
Protein Sequence:  
 MLIGYARVSK ADGSQSLDLQ HDALRAAGVE RDNIYDDLAS GGRDDRPGLT ACLKSLRDGD VLVVWKLDRL GRSLAHLVNT VKELSDRKIG LRVLTGKGAQ
IDTTTASGRM VFGIFATLAE FERDLIRERT MAGLASARAR GRKGGRKFAL TKAQVRLAQA AMAQRDTSVS DLCKELGIER VTLYRYVGPK GELRDHGKHV
LGLT

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpA N-ter TnpA N-ter Tn5393.10 363 3787-4149 +
Class:   Transposase
Transpoase Chemistry:   DDE
Protein Sequence:  
 MPRRVTLTDR QKDALLRLPT SQTDLLKHYT LSDEDLGHIR LRRRAHNRFG FALQLCVLRY PGRVLAPGEL IPAEVIEFIG AQLGLGADDL VDYAAREETR
HEHLAELRGL YGFRTFSGRG A

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
ABC-F ABC-F Tn5393.10 1656 5713-7368 -
Class:   Passenger Gene
Sub Class:   Other
Comment:   ribosomal protection protein
Protein Sequence:  
 MFINLIARKG GDCMELIKMR GIEKYFGGKL LFTFDKLTVF KNDIIGVVGL NGSGKTTLLE IINNDIAPDK GNVEVKGDIS YYKQFGQYHE SVDSWQLKEF
RSSSTISEGW FSGGEKTRLR LAETFSKSSS ILLLDEPTAN LDTKGIQLLK RNLGKYNTMM IISHDTNLLD ELCNRIIEID NNTINCFDGN YTAYKQQKEH
QIHTEKREYE NYQAKKKQLE EAYLQKKRQA EAITDKPRNM SNSEIRARSF ISTYKSFGGR QKAIAKQAKA VQSRIEQLDV KEQVEEQANI RINFELTNPP
KNKILIRGEE VTFGYDNHLI FNHASFEIRN KQKVAVLGDN GSGKSTLFSL IRNKYEGIYA VPKLKIGYLY QEFENLQPDK TLLESVLSDS VQENHTVYTV
LMNLLFTIED FDKKVAVLSG GEKIRLSFAK LIVSDYNLLI LDEPTNYLDL PSIEVVKSVL KEYEGTIIFA SHDEAFINEL STELFIIDNK KLQGYRGNLE
EFKNKTDANI EQLQQEIEQI QLSQAKLLME NETNPRKIEK IKKRYEEMTR V

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
NAD(P)-dependent oxidoreductase NAD(P)-dependent oxidoreductase Tn5393.10 876 7421-8296 -
Class:   Passenger Gene
Sub Class:   Other
Sequence Family:  Short-chain dehydrogenase
Protein Sequence:  
 MTFNNNENTR VWFITGASSG LGYEFTKKAL ESGEKVVGVA RNIEKLNELK CQFEGMLLPL SLDVTDRSAV STTVETAIKH FGRLDIVINN AGNMVMGMIE
EFSEDEVRSQ METNFFGTVW VSQAVMPYLR AQESGHIIQI SSIGGLISGP MSGIYSASKF ALEGFSEALA QEAAHFGIKV SIVEPGGYWT NLYLKMSFTT
QKKEYDSLRE KLAQQYSNES VDSDPKLAAE AIMKLVNSEN PPLRLVLGSL VYDLAVENAE KRIFTWKEWE SVSRSSEHGI PAPEGYGIIE E

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
BRP(MBL) (ARO:3001205) BRP(MBL) Tn50_p 381 9198-9578 -
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Target:   glycopeptide antibiotic (ARO:3000081)
Sequence Family:  Bleomycin resistant protein (ARO:3004256)
Comment:   loose match 57% to reference sequence for ARO:3001205 (bitscore: 142)||Synonyms: blmS, ble, BRP, blmA, BLMT
Protein Sequence:  
 MTDQATPNLP SRDFDSTAAF YERLGFGIVF RDAGWMILQR GDLMLEFFAH PGLDPLASWF SCCLRLDDLA EF*RQCKSVG IQETSSGYPR IHAPELQEWG
GTMAALVDPD GTLLRLIQNE LLAGIS

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
APH(3')-IIa (ARO:3002644) APH(3')-IIa Tn50_p 795 9599-10393 -
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Target:   aminoglycoside antibiotic (ARO:0000016)
Sequence Family:  APH(3') (ARO:3000126)
Protein Sequence:  
 MIEQDGLHAG SPAAWVERLF GYDWAQQTIG CSDAAVFRLS AQGRPVLFVK TDLSGALNEL QDEAARLSWL ATTGVPCAAV LDVVTEAGRD WLLLGEVPGQ
DLLSSHLAPA EKVSIMADAM RRLHTLDPAT CPFDHQAKHR IERARTRMEA GLVDQDDLDE EHQGLAPAEL FARLKARMPD GEDLVVTHGD ACLPNIMVEN
GRFSGFIDCG RLGVADRYQD IALATRDIAE ELGGEWADRF LVLYGIAAPD SQRIAFYRLL DEFF

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnp_truncated Tnp_truncated IS50L 1353 10500-11852 -
Class:   Transposase
Transpoase Chemistry:   DDE
Comment:   truncated to 421 amino acids by ochre mutation in C-terminal region which creates a promoter for aphA2 expression||non-functional
Protein Sequence:  
 MITSALHRAA DWAKSVFSSA ALGDPRRTAR LVNVAAQLAK YSGKSITISS EGSEAMQEGA YRFIRNPNVS AEAIRKAGAM QTVKLAQEFP ELLAIEDTTS
LSYRHQVAEE LGKLGSIQDK SRGWWVHSVL LLEATTFRTV GLLHQEWWMR PDDPADADEK ESGKWLAAAA TSRLRMGSMM SNVIAVCDRE ADIHAYLQDK
LAHNERFVVR SKHPRKDVES GLYLYDHLKN QPELGGYQIS IPQKGVVDKR GKRKNRPARK ASLSLRSGRI TLKQGNITLN AVLAEEINPP KGETPLKWLL
LTSEPVESLA QALRVIDIYT HRWRIEEFHK AWKTGAGAER QRMEEPDNLE RMVSILSFVA VRLLQLRESF TLPQALRAQG LLKEAEHVES QSAETVLTPD
ECQLLGYLDK GKRKRKEKAG SLQWAYMAIA RLGGFMDSKR TGIASWGALW

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
inh_truncated Inh_truncated IS50L 1188 10500-11687 -
Class:   Accessory Gene
Sub Class:   Inhibitor
Comment:   truncated by ochre mutation in C-terminal end
Protein Sequence:  
 MQEGAYRFIR NPNVSAEAIR KAGAMQTVKL AQEFPELLAI EDTTSLSYRH QVAEELGKLG SIQDKSRGWW VHSVLLLEAT TFRTVGLLHQ EWWMRPDDPA
DADEKESGKW LAAAATSRLR MGSMMSNVIA VCDREADIHA YLQDKLAHNE RFVVRSKHPR KDVESGLYLY DHLKNQPELG GYQISIPQKG VVDKRGKRKN
RPARKASLSL RSGRITLKQG NITLNAVLAE EINPPKGETP LKWLLLTSEP VESLAQALRV IDIYTHRWRI EEFHKAWKTG AGAERQRMEE PDNLERMVSI
LSFVAVRLLQ LRESFTLPQA LRAQGLLKEA EHVESQSAET VLTPDECQLL GYLDKGKRKR KEKAGSLQWA YMAIARLGGF MDSKRTGIAS WGALW

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpA C-ter TnpA C-ter Tn5393.10 1800 11947-13746 +
Class:   Transposase
Transpoase Chemistry:   DDE
Protein Sequence:  
 LVAMATRLTA TMADDPLNHV LDGYHRFRRY APRMLRLLDL RAAPVALPLL EAVTALRTGL NDAAMTSFLR PSSKWHRHLR AQRAGDARLW EIAVLFHLRD
AFRSGDVWLT RSRRYGDLKH ALVPAQSIAE GGRLAVPLRP EEWLADRQAR LDMRLRELGR AARAGTIPGG SIENGVLHIE KLEAAAPTGA EDLVLDLYKQ
IPPTRITDLL LEVDAATGFT EAFTHLRTGA PCADRIGLMN VILAEGINLG LRKMADATNT HTFWELIRIG RWHVEGEAYD RALAMVVEAQ AALPMARFWG
MGTSASSDGQ FFVATEQGEA MNLVNAKYGN TPGLKAYSHV SDQYAPFATQ VIPATASEAP YILDGLLMND AGRHIREQFT DTGGFTDHVF AACAILGYRF
APRIRDLPSK RLYAFNPSAA PAHLRALIGG KVNQAMIERN WPDILRIAAT IAAGTVAPSQ ILRKLASYPR QNELATALRE VGRVERTLFM IDWILDAELQ
RRAQIGLNKG EAHHALKRAI SFHRRGEIRD RSAEGQHYRI AGMNLLAAII IFWNTMKLGE VVANQKRDGK LLSPDLLAHV SPLGWEHINL TGEYRWPKP

 Internal Transposable Elements (TE)     

TnCentral Accession TE Name Type Coordinates Length
IS1133-Z12167 IS1133 Insertion Sequence 1815-3046 1232
IS50L-U00004.1 IS50L Insertion Sequence 10411-11944 1534

 Internal Repeat Elements     

Name Associated Mobile Element Coordinates Sequence (Top Strand)
IRL Tn5393.10 1-40 GGGGTCGTTT GCGGGAGAGG GCGAAATCCT ACGCTAAGGC
IRR IS1133 1815-1841 TGGACTTGCA CCGGTTGTGT TCCGGTC
IRL IS1133 3020-3046 CTGGCCTTGC TTTGGCTCCG TTCAGGT
IRR IS50 10411-10419 CTGTCTCTT
IRL IS50L 11936-11944 TTCTCAGTC
IRRl Tn5393.10 13699-13779 ACCCTTGTGT AGTTAGAGTG GCCTCTTATA GCGACCGGTT TCGGAATCGC
ATCCTAAGGC GGGGGAGGGC GTTTGCTGGG G