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| Name: Tn1696 |
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| Family: Tn3 Group: Tn21 |
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| Evidence of Transposition: no |
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| Host |
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| Host Organism: | Pseudomonas aeuroginosa | Molecular Source: | plasmid R1033 |
| Place of Origin: | Spain | | |
| | Other Geographic Information: | clinical strain |
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| Map |
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| Terminal Inverted Repeats (IR) |
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| IRL (Length: 38 bp) |  | GGGGTCGTCTCAGAATTCGGAAAATAAAGCACGCTAAG |
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| Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGGGTCGTCT CAGAATTCGG AAAATAAAGC ACGCTAAGGC GTAGTCACCC CGTGACTCCC CCGCGCCGAT GCAGCGAGCT TCGTTCCGTC TTGCAGTGAC 100
GCAATCAGCG GGCAGGAAAC GTTCCCTTTC CGCGCATGGC AGGCGCACAC CAGTTCAGAC AGCACGGCCT CCATGCGTGC CAAGTCGGCC ATCTTCTCGC 200
GCACATCCTT GAGCTTGTGC TCGGCCAGGC CGCTGGCTTC CTCGCAATGG GTGCCATCCT CCAGCCGCAG TAGCTCGGCG ATTTCGTCCA GGCTAAAGCC 300
CAGCCGCTGG GCCGATTTCA CGAACCGCAC TCGTGTTACA TCCGCCTCGC CATAGCGGCG AATGCTGCCA TAGGGCTTGT CTGGCTCCGG CAGCAGGCCC 400
TTGCGCTGGT AGAACCGGAT GGTCTCCACA TTGACCCCGG CCGCCTTGGC AAAAACGCCA ATGGTCAGAT TCTCAAAATT AATTTGCATA TCGCTTGACT 500
CCGTACATAA CTACGGAAGT AAGCTTAAGC TATCCAAACC AAATTTGAAA GGACAAGCGT ATGTCTGAAC CACAAAAGTC TGAACCACAA AACGGGCGCG 600
GCGCGCTCTT CGCCGGTGGG CTGGCCGCCA TTCTTGCGTC GGCCTGCTGC CTGGGGCCGC TGGTTTTGAT CGCCTTGGGG TTCAGCGGGG CATGGATCGG 700
CAACCTGACG GTGCTGGAAC CCTATCGCCC GATCTTCATC GGCGCAGCGC TGGTCGCGCT GTTTTTCGCC TGGCGGCGCA TCTACCGCCC GGCGCAAGCC 800
TGCAAACCGG GTGAGGTCTG CGCGATTCCC CAAGTGCGAG CTACTTACAA GCTCATTTTC TGGATCGTGG CCGCGCTGGT CCTGGTCTCG CTCGGATTTC 900
CCTACGTCAT GCCATTTTTC TATTAATCAC AGGAGTTCAT CATGAAAAAA CTGTTTGCCG CCCTCGCCCT CGCTGCCGTT GTTGCCCCCG TGTGGGCCGC 1000
CACCCAGACC GTCACGCTGT CCGTGCCTGG CATGACCTGC GCCTCTTGCC CGATCACTGT CAAGCACGCG CTTTCCAAGG TTGAGGGCGT GAGCAAGACC 1100
GACGTAAGTT TCGACAAGCG CCAGGCCGTC GTCACCTTCG ACGATGCCAA GACCAACGTC CAGAAGTTGA CCAAGGCGAC CGAGGACGCG GGCTATCCGT 1200
CCAGCCTCAA ACGCTGATCC GTTAACCGAA CTCGGGAGCG ACACATGGGA CTCATCACGC GCATCGCTGG CAAAACCGGC GCGCTCGGCA GCGTCGTTTC 1300
CGCGATGGGC TGCGCCGCCT GTTTTCCTGC CATCGCCAGC TTTGGCGCGG CCATCGGACT GGGCTTCTTG AGCCAGTACG AGGGGCTATT CATTGGCATC 1400
CTGCTGCCGA TGTTCGCCGG CATCGCGTTA CTCGCCAATG CTATCGCTTG GCTCAATCAT CGACAGTGGC GACGCACGGC GCTCGGCACG ATAGGCCCGA 1500
TCTTGGTGCT GGCAGCGGTG TTTTTAATGC GGGCTTACGG CTGGCAGAGC GGTGGACTGC TCTATGTCGG CCTGGCCTTG ATGGTTGGGG TGTCGGTCTG 1600
GGATTTCATC TCGCCAGCAC ATCGCCGCTG CGGGCCGGAC AGCTGTGAAT TGCCAGAACA ACGTGGCTGA CGGCAACAGC CGTAGCCACC ACAGAAAAGG 1700
AAAAATACAT GACCACCCTG AAAATCACCG GGATGACCTG CGACTCGTGC GCGGCTCACG TCAAGGAAGC CTTGGAGAAA GTGCCCGGCG TGCAATCGGC 1800
GCTGGTGTCC TATCCGAAGG GCACAGCGCA ACTCGCCATT GAGGCGGGCA CGTCATCGGA TGCGCTGACT ACCGCCGTGG CCGGACTGGG CTACGAGGCA 1900
ACGCTTGCCG ATGCGCCACC GACGGACAAC CGCGCCGGCC TGCTCGACAA GATGCGCGGC TGGATAGGGG CCGCTGATAA GCCCAGTGGC AACGAACGCC 2000
CGTTGCAGGT CGTCGTCATT GGTAGCGGTG GAGCCGCGAT GGCGGCAGCA CTGAAGGCCG TCGAGCAAGG CGCGCAGGTC ACGCTGATTG AGCGCGGCAC 2100
CATCGGCGGC ACCTGCGTCA ACGTCGGTTG TGTGCCGTCC AAGATCATGA TCCGCGCCGC CCACATCGCC CATCTGCGCC GGGAAAGCCC ATTCGACGGC 2200
GGCATGCCAC CCACACCGCC GACGATCTTG CGCGAGCGGC TGCTGGCCCA GCAGCAGGCC CGTGTCGAAG AACTCCGTCA TGCCAAGTAC GAAGGCATCC 2300
TGGACGGCAA TTCAGCCATC ACCGTTCTGC ACGGTGAAGC GCGTTTCAAG GACGACCAGA GCCTTATCGT TAGTTTGAAC GAGGGTGGCG AGCGCGTCGT 2400
GATGTTCGAC CGCTGCCTGG TCGCCACGGG TGCCAGCCCG GCGGTCCCGC CGATTCCGGG CTTGAAAGAG TCACCCTACT GGACTTCCAC CGAGGCCCTG 2500
GCGAGCGACA CCATTCCCGA ACGCCTTGCC GTAATCGGCT CGTCGGTGGT GGCGCTGGAG CTGGCGCAAG CCTTTGCCCG GCTGGGCAGC AAGGTCACGG 2600
CCCTGGCGCG CAATACCTTG TTCTTCCGTG AAGACCCGGC CATCGGCGAG GCGGTGACAG CCGCTTTCCG TGCCGAGGGC ATCGAGGTGC TGGAGCACAC 2700
GCAAGCCAGC CAGGTCGCCC ATATGGACGG TGAATTCGTG CTGACCACCA CGCACGGTGA ATTGCGCGCC GACAAGCTGC TGGTCGCCAC CGGCCGGACA 2800
CCGAACACGC GCAGCCTGGC ATTGGAAGCG GCGGGGGTAG CCGTCAATGC GCAGGGGGCC ATCGTCATCG ACAAGGGCAT GCGCACCAGT AGCCCGAACA 2900
TCTACGCGGC CGGCGACTGC ACCGACCAGC CGCAGTTCGT CTATGTGGCG GCAGCGGCCG GCACTCGTGC GGCGATCAAC ATGACTGGCG GCGATGCGGC 3000
CCTGGACCTG ACCGCAATGC CGGCCGTGGT GTTCACCGAC CCGCAGGTCG CCACCGTGGG CTACAGCGAG GCGGAAGCAC ATCACGACGG GATCGAGACC 3100
GACAGTCGCC TGCTAACACT GGATAACGTG CCGCGTGCGC TTGCCAACTT CGACACACGC GGCTTCATCA AGCTGGTCAT CGAGGAAGGT AGCGGACGGC 3200
TCATCGGCGT GCAAGCGGTG GCCCCGGAAG CGGGTGAACT GATCCAGACG GCGGTGCTCG CCATTCGCAA CCGTATGACC GTGCAGGAAC TGGCCGACCA 3300
ATTGTTCCCC TACCTGACCA TGGTCGAAGG GCTGAAGCTC GCGGCGCAGA CCTTCAGCAA GGACGTGAAG CAGCTTTCGT GCTGCGCCGG ATGAGGAAAA 3400
GGAGGTGTTC AATGAGCGCC TACACAGTGT CCCGGCTGGC CCTTGATGCC GGGGTGAGCG TGCATATCGT GCGCGACTAC CTGCTGCGCG GATTGCTACG 3500
GCCGGTCGCG TACACCACGG GCGGCTACGG CTTGTTCGAT GACACCGCGT TGCAACGGCT GCGCTTTGTA CGGGCTGCCT TCGAAGCGGG TATCGGCCTG 3600
GACGCACTGG CGCGGCTGTG CCGGGCGCTG GATGCTGCGG ACGGTGACGG TGCGTCTGCG CAGCTTGCCG TGTTGCGGCA ACTCGTCGAG CGTCGGCGCG 3700
AGGCCCTGGC CAGCCTCGAA ATGCAACTGG CCGCCATGCC AACCGAACCG GCACAGCACG CGGAGAGTCT GCCATGAACA GCCCAGAGCA CTTGCCGTCT 3800
GAGACGCACA AACCGATCAC CGGCTACTTG TGGGGCGCGC TGGCCGTGCT CACCTGTCCC TGCCATTTGC CGATTCTCGC CATTGTGCTA GCCGGCACGA 3900
CGGCCGGCGC GTTCATCGGG GAGCACTGGG GTATTGCAGC CCTCACGCTG ACCGGCTTGT TTGTCCTGTC TGTGACGCGG CTGCTGCGGG CCTTCAAGGG 4000
AAGATCATGA CCGCTTCCCA GCCAGCCGAG AGTGGGCAGC TTTGAGCTTC GCTACCAATC TGGAGGAGTA CCACCATGAA CGCAAACGCC CCGAACACTG 4100
CCAGTTGCAC CACCTGCTGC GAATGCTGCA AAGAAATTCC GCTCGATGCC GCCTTCACCC CGGAAGGCGC GGAATACGTC GAACATTTCT GCGGGCTGGA 4200
TTGCTATGAA CGCTTCCAGG CACGCGCCAA GGCCGCGACA GAATCTGACA TTGCGCCTGT CCCTGGCGGT TCGCAGCCGT CAGATTGAGG CATACCCTAA 4300
CTTGATGTCA GATGCCATGT GTCATTTTCA GAAGACGACT GCACCAGTTG ATTGGGCGTA ATGGCTGTTG TGCAGCCAGC TCCTGACAGT TCAATATCAG 4400
AAGTGATCTG CACCAATCTC GACTATGCTC AATACTCGTG TGCACCAAAG CGAGGTGAGC ATGGCGACGG AGGCTCTGTT GCAAAGATTG GCGGCAGTCA 4500
GAGGTAGGCT GTCGCTCTGC GCCGATCAGG CGGCTGCTGC GAAATGGTGG TTGAGCATGC CCATGGCCTC CGTCAGCGCC GAGGGCCCAA TGCCAAAAGC 4600
TCTCTCCACA AGGCGCACCT CGCCCCTGAT GCCGGGCTGC AGGCACCAGG GGCGAGCCTG TCCTTTGCGC AGGGCTCGCA TGACTTCGAA TCCCTTGATC 4700
GTGGCATAGG CCGTGGGGAT CGATTTGAAA CCGCGCACCG GCTTGATCAG TATCTTGAGC TTTCCGTGAT CGGCCTCGAT CACGTTATTG AGGGCTCTGT 4800
TGCAAAGATT GGCGGCAGTC AGAGGTAGGC TGTCGCTCTG CGCCGATCAG GCGGCTGCTG CGAAATGGTG GTTGAGCATG CCCATGGCCT CCGTCAGCGC 4900
CGAGGGCCCA ATGCCAAAAG CTCTCTCCAC AAGGCGCACC TCGCCCCTGA TGCCGGGCTG CAGGCACCAG GGGCGAGCCT GTCCTTTGCG CAGGGCTCGC 5000
ATGACTTCGA ATCCCTTGAT CGTGGCATAG GCCGTGGGGA TCGATTTGAA ACCGCGCACC GGCTTGATCA GTATCTTGAG CTTTCCGTGA TCGGCCTCGA 5100
TCACGTTATT GAGATACTTC ACCTGCCGGT GGGCCGTCTC CCGGTCCAGC TTTCCTTCGC GCTTCAATTC GGTGATCGCT GCACCATAGC TCGGCGCTTT 5200
GTCGGTATTG AGCGTGGCAG GCTTTTCCCA GTGCTTCAGG CCTCGCAGGG CCTTGCCCAG GAACCGCTTC GCTGCCTTGG CGCTGCGGGT CGGCGACAGG 5300
TAGAAATCGA TCGTGTCGCC CCGCTTGTCG ACTGCCCGGT ACAGGTAGGT CCACTTGCCC CGCACCTTGA CGTAGGTTTC ATCCAGGCGC CAGCTCGGAT 5400
CAAAGCCACG CCGCCAGAAC CAGCGCAGCC GCTTCTCCAT CTCCGGGGCG TAGCACTGGA CCCAGCGATA GATCGTCGTA TGGTCGACCG AAATGCCGCG 5500
TTCCGCCAGC ATTTCCTCAA GGTCGCGATA GCTGATCGGA TAGCGACAAT ACCAGCGCAC CGCCCACAGG ATCACATCAC CCTGGAAATG GCGCCACTTG 5600
AAATCCGTCA TCGTTCCGTC CGTCCAATCT CCGCCAAGCA TGCTCAAGCT TCACGATTTT TGCAACAGAG CCCACACGAG TATTGAGCAT AGTCGAGATT 5700
GGTGCAGATC ACTTCTGATA TTGAACTGTC AGGAGCTGGC TGCACAACAG CCATTACGCC CAATCAACTG GTGCAGTCGT CTTCTGAAAA TGACATTTGG 5800
TATCTCTCAT AAACGGATGT TTTTGAGAGA ACTATCTTCG GCCTTCACAC GCACGAAAGG CGGCGAAGCT CCGCCGTTAA TCCGTCCGCC GGAGATCTCG 5900
CCCAGGCAGG CTGAAGGCCG AGCAAGCCTG ACAGGCCCGA AAAGCCCGGC ACGGGCGTCG GCGGCGATGA CGGCGGCGGC ATTATCCAGG GTTGATGATG 6000
GAAGTGGAGG ATATCGACAA CCTCTCGCGC AACCAAGACA TCGCGGTCGG ACTGCAAGTG ATCTTGAAGC CACGGGCCCG TCCCACCCCG ACATGGACCT 6100
CGATGCCCGA ACGGACGTTA GATTTCGAGT TCTAGGCGTT CTGCGATGAA GGTTGGATCC CAGCCGGGAT TGAAAGTGTC GACGTGGGTG AATCCGAGCC 6200
GCTCGTATAG GCCACGCAGG TTCGGGTGGC AGTCGAGCCG CAGCTTGGCG CACCCCTGCG TTCGCGCGGC ATGGCGGCAA GCCTCGATCA GCGCGGAGCT 6300
GACACCCCGG CCCGCATGTG TCCGTCGCAC CGCGAGCTTG TGCAGATATG CGGCCTCCCC CTTGAGGGCG TCGGGCCAGA ACTCGGGATC CTCGGCCGAC 6400
AAGGTGCAAC AGCCGACGAT GCCGTCGCTG CAACTCGCGA CTAGGAGCTC GGATCTCAGG ACGAAGGTCT CCGCGAATGT CCGGTCGATC CGCGCGACGT 6500
CCCAGGCGGG CGTTCCCTTG GCGGACATCC ACGCCGCAGC GTCGTGCATC AGCCGCACAA CCTCGTCGAT ATCACCCGAG CAGGCGACCC GAACGTTCGG 6600
AGGCTCCTCG CTGTCCATTC GCTCCCCTGG CGCGGTATGA ACCGCCGCCT CATAGTGCAG TTTGATCCTG ACGAGCCCAG CATGTCTGCG CCCACCTTCG 6700
CGGAACCTGA CCAGGGTCCG CTAGCGGGCG GCCGGAAGGT GAATGCTAGG CATGATCTAA CCCTCGGTCT CTGGCGTCGC GACTGCGAAA TTTCGCGAGG 6800
GTTTCCGAGA AGGTGATTGC GCTTCGCAGA TCTCCAGGCG CGTGGGTGCG GACGTAGTCA GCGCCATTGC CGATCGCGTG AAGTTCCGCC GCAAGGCTCG 6900
CTGGACCCAG ATCCTTTACA GGAAGGCCAA CGGTGGCGCC CAAGAAGGAT TTCCGCGACA CCGAGACCAA TAGCGGAAGC CCCAACGCCG ACTTCAGCTT 7000
TTGAAGGTTC GACAGCACGT GCAGCGATGT TTCCGGTGCG GGGCTCAAGA AAAATCCCAT CCCCGGATCG AGGATGAGCC GGTCGGCAGC GACCCCGCTC 7100
CGTCGCAAGG CGGAAACCCG CGCCTCGAAG AACCGCACAA TCTCGTCGAG CGCGTCTTCG GGTCGAAGGT GACCGGTGCG GGTGGCGATG CCATCCCGCT 7200
GCGCTGAGTG CATAACCACC AGCCTGCAGT CCGCCTCAGC AATATCGGGA TAGAGCGCAG GGTCAGGAAA TCCTTGGATA TCGTTCAGGT AGCCCACGCC 7300
GCGCTTGAGC GCATAGCGCT GGGTTTCCGG TTGGAAGCTG TCGATTGAAA CACGGTGCAT CTGATCGGAC AGGGCGTCTA AGAGCGGCGC AATACGTCTG 7400
ATCTCATCGG CCGGCGATAC AGGCCTCGCG TCCGGATGGC TGGCGGCCGG TCCGACATCC ACGACGTCTG ATCCGACTCG CAGCATTTCG ATCGCCGCGG 7500
TGACAGCGCC GGCGGGGTCT AGCCGCCGGC TCTCATCGAA GAAGGAGTCC TCGGTGAGAT TCAGAATGCC GAACACCGTC ACCATGGCGT CGGCCTCCGC 7600
AGCGACTTCC ACGATGGGGA TCGGGCGAGC AAAAAGGCAG CAATTATGAG CCCCATACCT ACAAAGCCCC ACGCATCAAG CTTTTGCCCA TGAAGCAACC 7700
AGGCAATGGC TGTAATTATG ACGACGCCGA GTCCCGACCA GACTGCATAA GCAACACCGA CAGGGATGGA TTTCAGAACC AGAGAAAGAA AATAAAATGC 7800
GATGCCATAA CCGATTATGA CAACGGCGGA AGGGGCAAGC TTAGTAAAGC CCTCGCTAGA TTTTAATGCG GATGTTGCGA TTACTTCGCC AACTATTGCG 7900
ATAACAAGAA AAAGCCAGCC TTTCATGATA TATCTCCCAA TTTGTGTAGG GCTTATTATG CACGCTTAAA AATAATAAAA GCAGACTTGA CCTGATAGTT 8000
TGGCTGTGAG CAATTATGTG CTTAGTGCAT CTAACGCCTG AGCTCAGCCG ACCGAAACCG CGTAGCGGTT TTGGGTCGGC TGCAGCGATT TGTTGGGCGA 8100
TAGCTTGCCA CATTCTCTCA ACGATTGGGA TTTGATGTAC TTTCCGCACT TTGTAGCGCG ACCACATCAT GCTCCCCCTG GCCGCGAGAG CCCTTCACTC 8200
GGGAAACACA AGACAGACCG AGCACGACTG TTGCAAGGGT CAAACAGTAC ACGACAACCG GCCAAGCCGT GTTGCGCGGC AACAGCGAAA TGATCAACGT 8300
TCCGATGCTT CCTAGCAGTA CACCGCCCAA GCAGAAGTAG ACTGCCGTGA CCGTTCCAGC AACATGGTCG AATCCTCGAA GAGCGCCATT GGGCGCCACA 8400
GATACCGCTG TGGCGACACC AATACCCACT AGCCACATTG GAGCAATAAA GCCTAACACG GACTGCAAAG CCCATATTTC GGTGATGGCA AGCAATACTG 8500
CTCCAGCTAT CAGGCATCCC ATTCCCATTC GCAAGACACT TGGGCTGCCC CACTTGGGTA TCACACGCCC CATAAAACGA GCCGTAAACA CCATGGCAAT 8600
TGCCACTGTG GCGAACAGCA GGCTGAAGCC AAGCTGAGAC ACACCTTGCC TGCCCATCAT TAGTCCGGGC GCAATGGAGA AAAAGACGAA GAAGCTACCC 8700
ATTCCAGCGG CGTAACACAA CGTGTACAAC CAGAAGTTCA GGCACTTAAC GGGGAGTAGC AGCTGCGACC ATTGCAAGCC CGCAACTCGT TGCACCCGGG 8800
TTTCAGGCCA GAATCGCCAC GCTGCTGCAG ATGCAGCGAT CATGCCCAAA CCTAGAAACG CAAAGATAGC CCGCCACCCA AGCCACATGT CGACGAGCGC 8900
TCCGAGCAAT GGGCCTACCG CCGGGACCAT GGCCAGCATG GATCCGAGTA TGCCGTAAAT GACATTACTT TCCTCGCGAC CTGCGTAAAT GTCACGTACT 9000
GTTGCAAATG TGGAAACAAG GCACGCCGAG GCACCACAAG CCTGAAGAAT CCGAAGCCCC AGAAAGACTT CAGCCGATGA CGTAAGAGCG AGGCCCATTG 9100
ACGCCACAAC GTAGGCGAGG CCACCTCCCA GTAGAACGGG GCGGCGCCCC AGTCGGTCCG ATAGCGGTCC AAACAAGAGC TGACCGGCAC CAATCATGAC 9200
CAAGTACGTT GTCAGCGTAA GCTGAATTGT GCTCGCTGTC GTACCAAGCG CGTTTGGCAT AAACGGCACT GCTGGCAAGT ACATGTCCAT GCCGAGTGAT 9300
GCCAATAAAT CGAACGGTGA TAACAACAAC ACCGTGGCGG CAAGGGAGTA CCGCCAACTA AAGTTTTTTG AGCTCACGAA ACCATCTCCT TGAACAAAGG 9400
ATTTGGCGGC GCTCCCGTAG AGCAAAAGGA TTCATGAGAA CGCCGCAACA ACCGAAAAAT GAAGGTTGCT GCGGCTTACT TGTCTGCGTT CTTGGAAGTG 9500
CTCATCTGCT GACTATCTCA TGATTGAATT TGAATCGTAA CAACTTTCAA GCAACTCTGC AAGGAGCCTT ATTGTGCGCC CAACGCCGGA GTTAAGCCGC 9600
CGCGCGTAGC GCGGTCGGCT TGAACGAATT GTTAGACATC ATTTACCAAC TGACTTGATG ATCTCGCCTT TCACAAAGCG AATAAATTCT TCCAAGTGAT 9700
CTGCGCGTGA GGCCAAGTGA TCTTCTTTTT GTCCCAGATA AGCTTGCTTA GCTTCAAGTA AGACGGGCTG ATACTGGGCA GGTAGGCGTT TTATTGCCCA 9800
GTCGGCAGCG ACATCCTTCG GCGCGATTTT GCCGGTTATT GCGCTGTACC AAATGCGGGA CAACGTAAGC ACTACATTTC GCTCATCGCC GGCCCAGTCG 9900
GGCTGCGAGT TCCATAGCTT CAAGGTTTCC CTCAGCGCCT CGAATAGATC CTGTTCAGGA ACCGGGTCAA AGAATTCCTC CGCTGCCGGA CCTACCAAGG 10000
CAACGCTATG TTCTCTTGCT TTTGTAAGCA GGATAGCTAG ATCAATGTCG ATCATGGCTG GCTCGAAGAT ACCCGCAAGA ATGTCATTGC GCTGCCATTC 10100
TCCAAATTGC AGCTCGCGCT TAGCCGGATA ACGCCACGGG ATGATGTCGT CATGCACGAC AAGGGTGACT TCTATAGCGC GGAGCGTCTC GCTCTCGCCA 10200
GGGAAAGCCG AAGCCTCCAT AAGGTCATTG AGCAATGCTC GCCGCGTCGT TTCATCAAGC TTTACGGCCA CAGTAACCAA CAAATCAATA TCGCTGTATG 10300
GCTTCAGGCC GCCATCCACT GCGGAGCCGT ACAAATGCAC GGCCAGCAAC GTTGATTCCA GATGGCGCTC AATGACGCTT AGCACCTCTG ATAGTTGGTT 10400
CGAAATTTCG ATGGTCACCG CTACCCTCAT GATGTCTAAC GGCCAAGGTA AGCGGCCCGC AGAATGCGGG TCCGCTTGAC CGCAGAGTTA GACCCGAAGG 10500
CCAAAAGGGA GCGCCCGGCC TTGAAGAAGG GCGCAGCCCA AGAAAAACCG CTGGACCACG AAAGCGGCGC AGCGCTGCAA GAAGGATAGC TGGTGGCGCT 10600
TGCTGCACAA GCGCTGGAGG CCCAAAAGGC TAGAAAGCCT TTGGAACAGG GCGGAGCGCT GAAATAAGTG GCTGCGCGCA TAAAGCGGGT GATGGGACTA 10700
ACGCCTGAGT TAAGCCGGAG CGCTTTGCGG CCGCGGCGTT GTGACAATTT ACCGAACAAC TCCGCGGCCG GGAAGCCGAT CTCGGCTTGA ACGAATTGTT 10800
AGGTGGCGGT ACTTGGGTCG ATATCAAAGT GCATCACTTC TTCCCGTATG CCCAACTTTG TATAGAGAGC CACTGCGGGA TCGTCACCGT AATCTGCTTG 10900
CACGTAGATC ACATAAGCAC CAAGCGCGTT GGCCTCATGC TTGAGGAGAT TGATGAGCGC GGTGGCAATG CCCTGCCTCC GGTGCTCGCC GGAGACTGCG 11000
AGATCATAGA TATAGATCTC ACTACGCGGC TGCTCAAACC TGGGCAGAAC GTAAGCCGCG AGAGCGCCAA CAACCGCTTC TTGGTCGAAG GCAGCAAGCG 11100
CGATGAATGT CTTACTACGG AGCAAGTTCC CGAGGTAATC GGAGTCCGGC TGATGTTGGG AGTAGGTGGC TACGTCTCCG AACTCACGAC CGAAAAGATC 11200
AAGAGCAGCC CGCATGGATT TGACTTGGTC AGGGCCGAGC CTACATGTGC GAATGATGCC CATACTTGAG CCACCTAACT TTGTTTTAGG GCGACTGCCC 11300
TGCTGCGTAA CATCGTTGCT GCTGCGTAAC ATCGTTGCTG CTCCATAACA TCAAACATCG ACCCACGGCG TAACGCGCTT GCTGCTTGGA TGCCCGAGGC 11400
ATAGACTGTA CAAAAAAACA GTCATAACAA GCCATGAAAA CCGCCACTGC GCCGTTACCA CCGCTGCGTT CGGTCAAGGT TCTGGACCAG TTGCGTGAGC 11500
GCATACGCTA CTTGCATTAC AGTTTACGAA CCGAACAGGC TTATGTCAAC TGGGTTCGTG CCTTCATCCG TTTCCACGGT GTGCGTCACC CGGCAACCTT 11600
GGGCAGCAGC GAAGTCGAGG CATTTCTGTC CTGGCTGGCG AACGAGCGCA AGGTTTCGGT CTCCACGCAT CGTCAGGCAT TGGCGGCCTT GCTGTTCTTC 11700
TACGGCAAGG TGCTGTGCAC GGATCTGCCC TGGCTTCAGG AGATCGGAAG ACCTCGGCCG TCGCGGCGCT TGCCGGTGGT GCTGACCCCG GATGAAGTGG 11800
TTCGCATCCT CGGTTTTCTG GAAGGCGAGC ATCGTTTGTT CGCCCAGCTT CTGTATGGAA CGGGCATGCG GATCAGTGAG GGTTTGCAAC TGCGGGTCAA 11900
GGATCTGGAT TTCGATCACG GCACGATCAT CGTGCGGGAG GGCAAGGGCT CCAAGGATCG GGCCTTGATG TTACCCGAGA GCTTGGCACC CACGCTGCGC 12000
GAGCAGCTGT CGCGTGCACG GGCATGGTGG CTGAAGGACC AGGCCGAGGG CCGCAGCGGC GTTGCGCTTC CCGACGCCCT TGAGCGGAAG TATCCGCGCG 12100
CCGGGCATTC CTGGCCGTGG TTCTGGGTTT TTGCGCAGCA CACGCATTCG ACCGATCCAC GGAGCGGTGT CGTGCGTCGC CATCACATGT ATGACCAGAC 12200
CTTTCAGCGC GCCTTCAAAC GTGCCGTAGA ACAAGCAGGC ATCACGAAGC CCGCCACACC GCACACCCTC CGCCACTCGT TCGCGACGGC CTTGCTCCGC 12300
AGCGGTTACG ACATTCGAAC CGTGCAGGAT CTGCTCGGCC ATTCCGACGT CTCTACGACG ATGATTTACA CGCATGTGCT GAAAGTTGGC GGTGCCGGAG 12400
TGCGCTCACC GCTTGATGCG CTGCCGCCCC TCACTAGTGA GAGGTAGGGC AGCGCAAGTC AATCCTGGCG GATTCACTAC CCCTGCGCGA AGGCCATCGG 12500
TGCCGCATCG AACGGCCGGT TGCGGAAAGT CCTCCCTGCG TCCGCTGATG GCCGGCAGCA GCCCGTCGTT GCCTGATGGA TCCAACCCCT CCGCTGCTAT 12600
AGTGCAGTCG GCTTCTGACG TTCAGTGCAG CCGTCTTCTG AAAACGACAC CATGTGCAAA CGATGTCAGA ATAGAGTTAA ATTTCCTATT GATTGACATA 12700
TTCCGTCAAA GGTAATAGAT TTCATCCTGA CACTTTTGCC TTTGGAGGCA TCTTGCAAGG TCAACGCATC GGCTATGTCC GCGTCAGCAG CTTCGACCAG 12800
AACCCGGAAC GGCAATTGGA GGGTGTTCAG GTGGCGCGGG TGTTCACCGA CAAGGCTTCT GGCAAGGACA CCCAGCGTCC CGAGCTGGAA AGGCTGCTGG 12900
CCTTCGTCCG CGAGGGCGAC ACCGTGGTGG TGCATAGCAT GGACAGGCTG GCACGCAACC TTGATGACCT GCGCCGCATC GTCCAAGGGC TGACACAACG 13000
GGGCGTGCGC ATGGAGTTCG TCAAAGAAGG GCTGAAGTTC ACCGGCGAGG ACTCACCGAT GGCCAATCTG ATGCTGTCGG TCATGGGAGC CTTCGCTGAG 13100
TTCGAGCGCG CCCTGATCCG CGAACGTCAG CGCGAGGGAA TCGTGCTGGC CAAGCAGCGC GGTGCCTACC GGGGACGAAA GAAATCGCTG AACAGCGAAC 13200
AAATTGCCGA GTTGAAACGG CGAGTTGCGG CAGGCGACCA AAAAACCTTG GTGGCCCGTG ACTTCGGCAT CAGCCGCGAA ACCTTGTACC AGTACCTGCG 13300
GGAAGACTGA CCATGCCACG CCGCTCAATC CTGTCCGCCA CCGAGCGCGA AAGCCTGCTG GCACTGCCAG ATGCCAAAGA CGAACTGATA CGGCACTACA 13400
CGTTCAACGA AACCGACCTG TCGGTGATCC GTCAGCGTCG CGGCGCCGCG AATCGATTGG GCTTCGCTGT GCAGCTTTGC TACTTGCGAT TCCCTGGCAC 13500
CTTTTTGGGC GTCGATGAGC CTCCGTTTCC GCCCCTGTTG CGCATGGTGG CCGCGCAACT CAAGATGCCA GTGGAAAGTT GGAGCGAGTA CGGCCAGCGC 13600
GAACAGACAC GGCGGGAGCA CTTGGTCGAG CTGCAAACGG TTTTTGGGTT CAAGCCCTTC ACCATGAGCC ACTATCGGCA AGCCGTGCAT ACATTGACCG 13700
AGCTGGCCTT GCAGACCGAC AAAGGCATCG TGCTGGCGAG CGCACTTGTC GAGAATCTGC GGCGGCAGAG CATTATCCTG CCCGCCATGA ATGCCATCGA 13800
GCGCGCAAGC GCCGAGGCCA TCACCCGTGC CAACCGACGC ATTTACGCGG CGCTGACCGA TTCTTTGTTA TCACCCCACC GTCAGCGCCT GGACGAACTT 13900
CTCAAGCGCA AGGACGGCAG TAAAGTGACG TGGCTGGCAT GGCTGCGCCA GTCGCCTGCC AAACCGAACT CTCGCCACAT GCTCGAACAT ATTGAGCGCC 14000
TGAAATCCTG GCAAGCACTT GATCTGCCCG CAGGCATCGA GCGGCAGGTT CACCAGAACC GCCTGCTCAA AATCGCTCGT GAAGGTGGCC AGATGACGCC 14100
TGCTGATCTG GCAAAGTTCG AGGTGCAACG ACGCTATGCC ACGCTGGTAG CGCTGGCCAT CGAAGGCATG GCCACCGTCA CCGATGAAAT CATCGACCTT 14200
CACGATCGCA TCATCGGCAA GCTGTTCAAC GCGGCCAAGA ACAAGCATCA GCAGCAGTTC CAGGCTTCCG GCAAGGCGAT CAACGACAAG GTGCGGATGT 14300
ATGGGCGCAT CGGTCAAGCG TTGATTGAGG CCAAGCAAAG CGGCAGCGAT CCGTTCGCCG CCATCGAGGC CGTTATGCCC TGGGACACCT TCGCCGCCAG 14400
CGTCACCGAA GCGCAAACAT TGGCGCGGCC TGCCGACTTT GATTTCCTGC ACCACATCGG TGAAAGCTAT GCCACGCTAC GCCGCTACGC GCCGCAGTTC 14500
CTGGGCGTGC TCAAATTGCG GGCTGCGCCC GCCGCCAAGG GTGTGCTCGA TGCCATCGAC ATGCTGCGCG GCATGAACAG CGACAGCGCG CGCAAGGTGC 14600
CCGCCGATGC GCCAACCGCA TTCATCAAGC CGCGCTGGGC AAAGCTGGTT CTGACCGACG ACGGCATCGA CCGGCGTTAC TACGAGTTAT GCGCCCTGTC 14700
GGAGCTGAAG AACGCGCTGC GCTCCGGTGA TGTCTGGGTG CAGGGTTCTC GCCAGTTCAA GGACTTCGAC GAATACCTGG TGCCGGTCGA GAAGTTCGCC 14800
ACTTTGAAGC TGGCCAGCGA ATTGCCGCTG GCAGTGGCCA CCGACTGCGA CCAATACCTG CATGACCGGT TGGAATTGTT GGAGGCGCAA CTCGCCACAG 14900
TCAACCGCAT GGCTGCGGCC AACGACTTAC CGGATGCCAT CATCACCACC GCGTCAGGCC TGAAGATCAC GCCGCTGGAC GCGGCAGTAC CAGACGCCGC 15000
GCAAGCCATG ATCGACCAGA CAGCTATGCT GCTGCCGCAC CTCAAAATCA CCGAGTTGCT GATGGAGGTC GATGAATGGA CGGGCTTCAC CCGCCACTTC 15100
ACACACCTGA AGACCAGCGA CACGGCCAAG GACAAAACCT TGCTGTTGAC GACGATCCTG GCCGACGCGA TCAACCTGGG TCTGACCAAA ATGGCCGAGT 15200
CCTGCCCTGG CACCACCTAC GCCAAGCTGT CTTGGCTGCA AGCCTGGCAC ATCCGCGATG AAACCTATTC GACGGCGCTG GCCGAGCTGG TGAATGCGCA 15300
GTTTCGGCAA CCCTTCGCCG GCAACTGGGG TGACGGCACC ACGTCATCGT CGGACGGCCA GAACTTCAGA ACCGGCAGCA AAGCAGAAAG CACTGGTCAT 15400
ATCAACCCGA AGTATGGAAG CAGTCCAGGA CGGACTTTCT ACACCCATAT CTCCGACCAG TACGCGCCCT TCAGTGCCAA GGTGGTCAAC GTGGGCATTC 15500
GTGATTCAAC TTACGTGCTT GATGGCCTGC TGTACCACGA GTCGGACTTG CGCATCGAGG AACACTACAC CGACACGGCA GGCTTCACCG ATCACGTGTT 15600
TGGCTTGATG CATTTGCTGG GATTTCGCTT CGCGCCGCGT ATCCGTGACT TGGGCGAAAC CAAGCTATTC ATCCCCAAGG GCGATGCCGC CTATGACGCG 15700
CTCAAGCCGA TGATTAGCAG CGACAGGCTG AACATCAAGC AAATACGCGC CCATTGGGAT GAAATTCTGC GGCTGGCCAC CTCCATCAAG CAAGGCACGG 15800
TAACGGCTTC GCTGATGCTG CGCAAACTCG GCAGCTACCC GCGCCAGAAC GGCTTGGCCG TGGCGTTGCG CGAGCTGGGG CGCATCGAGC GCACGCTGTT 15900
CATTTTGGAT TGGCTGCAAA GCGTGGAGCT GCGCCGCCGC GTCCATGCGG GGCTGAATAA GGGCGAGGCG CGCAACGCGC TGGCCAGGGC GGTCTTCTTC 16000
TACCGATTGG GTGAAATCCG CGACCGCAGT TTTGAGCAGC AGCGCTACCG GGCCAGCGGC CTCAATCTGG TGACGGCGGC CATCGTGTTG TGGAACACGG 16100
TATATCTGGA GCGTGCCACC AGTGCTTTGC GTGGCAACGG CACGGCGCTG GACGACACAT TGTTGCAATA TCTGTCGCCG CTGGGGTGGG AGCACATCAA 16200
CCTGACCGGC GATTACCTAT GGCGCAGCAG CGCCAAGGTC GGTGCGGGGA AGTTTAGGCC ATTGCGACCG CTGCCACCGG CTTAGCGTGC TTTATTTTCC 16300
GTTTTCTGAG ACGACCCC
|
|
|
|
| Recombination Sites |
|
|
| Name |
Coordinates |
Gene |
Sequence |
| res_site_I |
4278-4308 |
31 |
CGTCAGATTG AGGCATACCC TAACTTGATG T |
| attC qacH_sul1 core |
6718-6751 |
34 |
CCGCTAGCGG GCGGCCGGAA GGTGAATGCT AGGC |
| attC cmlA6 core |
8035-8098 |
64 |
CGCCTGAGCT CAGCCGACCG AAACCGCGTA GCGGTTTTGG GTCGGCTGCA GCGATTTGTT
GGGC |
| attC-cmlA6 3'-end |
9578-9583 |
6 |
GCCCAA |
| attC aadA3 core |
9584-9637 |
54 |
CGCCGGAGTT AAGCCGCCGC GCGTAGCGCG GTCGGCTTGA ACGAATTGTT AGAC |
| attC DUF1010 core |
10440-10493 |
54 |
CGGCCAAGGT AAGCGGCCCG CAGAATGCGG GTCCGCTTGA CCGCAGAGTT AGAC |
| attC-DUF1010 3'-end |
10696-10701 |
6 |
GACTAA |
| attC AAC(3)-Ia core |
10702-10804 |
103 |
CGCCTGAGTT AAGCCGGAGC GCTTTGCGGC CGCGGCGTTG TGACAATTTA CCGAACAACT
CCGCGGCCGG GAAGCCGATC TCGGCTTGAA CGAATTGTTA GGT |
| attC-AAC(3)-Ia 3'-end |
11273-11278 |
6 |
ACCTAA |
| res_site_II |
12664-12698 |
35 |
TGTCAGAATA GAGTTAAATT TCCTATTGAT TGACA |
| res_site_III |
12701-12732 |
32 |
TTCCGTCAAA GGTAATAGAT TTCATCCTGA CA |
| attC aacA4 3'-end |
16254-16259 |
6 |
TTAGGC |
|
| ORFs |
|
|
| Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
| merR |
Tn1696 |
34-489 |
Passenger Gene |
Heavy Metal Resistance |
- |
| merT |
Tn1696 |
561-926 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| merP |
Tn1696 |
942-1217 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| merC |
Tn1696 |
1245-1670 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| merA |
Tn1696 |
1709-3394 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| merD |
Tn1696 |
3412-3777 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| merE |
Tn1696 |
3774-4010 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| tnp |
IS6100 |
4847-5611 |
Transposase |
|
- |
| WP_001424634.1 |
In4 |
5807-6094 |
Passenger Gene |
Hypothetical |
- |
| GNAT_fam |
In4 |
6118-6618 |
Passenger Gene |
Antibiotic Resistance |
- |
| sul1 (ARO:3000410) |
In4 |
6746-7585 |
Passenger Gene |
Antibiotic Resistance |
- |
| qacEdelta1 (ARO:3005010) |
In4 |
7579-7926 |
Passenger Gene |
Antibiotic Resistance |
- |
| cmlA6 (ARO:3002696) |
In4 |
8118-9377 |
Passenger Gene |
Antibiotic Resistance |
- |
| aadA3 (ARO:3002603) |
In4 |
9639-10430 |
Passenger Gene |
Antibiotic Resistance |
- |
| DUF1010 family protein |
In4 |
10436-10681 |
Passenger Gene |
Other |
- |
| AAC(3)-Ia (ARO:3002528) |
In4 |
10799-11263 |
Passenger Gene |
Antibiotic Resistance |
- |
| intI1 |
In4 |
11434-12447 |
Integron Integrase |
Class 1 |
+ |
| tnpR |
Tn1696 |
12753-13310 |
Accessory Gene |
Resolvase |
+ |
| tnpA |
Tn1696 |
13313-16285 |
Transposase |
|
+ |
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merR |
MerR |
Tn1696 |
456 |
34-489 |
- |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
|
MQINFENLTI GVFAKAAGVN VETIRFYQRK GLLPEPDKPY GSIRRYGEAD VTRVRFVKSA QRLGFSLDEI AELLRLEDGT HCEEASGLAE HKLKDVREKM
ADLARMEAVL SELVCACHAR KGNVSCPLIA SLQDGTKLAA SARGSHGVTT P
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merT |
MerT |
Tn1696 |
366 |
561-926 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
|
MSEPQKSEPQ NGRGALFAGG LAAILASACC LGPLVLIALG FSGAWIGNLT VLEPYRPIFI GAALVALFFA WRRIYRPAQA CKPGEVCAIP QVRATYKLIF
WIVAALVLVS LGFPYVMPFF Y
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merP |
MerP |
Tn1696 |
276 |
942-1217 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
|
MKKLFAALAL AAVVAPVWAA TQTVTLSVPG MTCASCPITV KHALSKVEGV SKTDVSFDKR QAVVTFDDAK TNVQKLTKAT EDAGYPSSLK R
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merC |
MerC |
Tn1696 |
426 |
1245-1670 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
|
MGLITRIAGK TGALGSVVSA MGCAACFPAI ASFGAAIGLG FLSQYEGLFI GILLPMFAGI ALLANAIAWL NHRQWRRTAL GTIGPILVLA AVFLMRAYGW
QSGGLLYVGL ALMVGVSVWD FISPAHRRCG PDSCELPEQR G
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merA |
MerA |
Tn1696 |
1686 |
1709-3394 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
|
MTTLKITGMT CDSCAAHVKE ALEKVPGVQS ALVSYPKGTA QLAIEAGTSS DALTTAVAGL GYEATLADAP PTDNRAGLLD KMRGWIGAAD KPSGNERPLQ
VVVIGSGGAA MAAALKAVEQ GAQVTLIERG TIGGTCVNVG CVPSKIMIRA AHIAHLRRES PFDGGMPPTP PTILRERLLA QQQARVEELR HAKYEGILDG
NSAITVLHGE ARFKDDQSLI VSLNEGGERV VMFDRCLVAT GASPAVPPIP GLKESPYWTS TEALASDTIP ERLAVIGSSV VALELAQAFA RLGSKVTALA
RNTLFFREDP AIGEAVTAAF RAEGIEVLEH TQASQVAHMD GEFVLTTTHG ELRADKLLVA TGRTPNTRSL ALEAAGVAVN AQGAIVIDKG MRTSSPNIYA
AGDCTDQPQF VYVAAAAGTR AAINMTGGDA ALDLTAMPAV VFTDPQVATV GYSEAEAHHD GIETDSRLLT LDNVPRALAN FDTRGFIKLV IEEGSGRLIG
VQAVAPEAGE LIQTAVLAIR NRMTVQELAD QLFPYLTMVE GLKLAAQTFS KDVKQLSCCA G
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merD |
MerD |
Tn1696 |
366 |
3412-3777 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
|
MSAYTVSRLA LDAGVSVHIV RDYLLRGLLR PVAYTTGGYG LFDDTALQRL RFVRAAFEAG IGLDALARLC RALDAADGDG ASAQLAVLRQ LVERRREALA
SLEMQLAAMP TEPAQHAESL P
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merE |
MerE |
Tn1696 |
237 |
3774-4010 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
|
MNSPEHLPSE THKPITGYLW GALAVLTCPC HLPILAIVLA GTTAGAFIGE HWGIAALTLT GLFVLSVTRL LRAFKGRS
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnp |
Tnp |
IS6100 |
765 |
4847-5611 |
- |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MTDFKWRHFQ GDVILWAVRW YCRYPISYRD LEEMLAERGI SVDHTTIYRW VQCYAPEMEK RLRWFWRRGF DPSWRLDETY VKVRGKWTYL YRAVDKRGDT
IDFYLSPTRS AKAAKRFLGK ALRGLKHWEK PATLNTDKAP SYGAAITELK REGKLDRETA HRQVKYLNNV IEADHGKLKI LIKPVRGFKS IPTAYATIKG
FEVMRALRKG QARPWCLQPG IRGEVRLVER AFGIGPSALT EAMGMLNHHF AAAA
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| WP_001424634.1 |
WP_001424634.1 |
In4 |
288 |
5807-6094 |
- |
| Class: | Passenger Gene |
| Sub Class: | Hypothetical |
Protein Sequence:
|
MSGWDGPVAS RSLAVRPRCL GCARGCRYPP LPSSTLDNAA AVIAADARAG LFGPVRLARP SACLGEISGG RINGGASPPF VRVKAEDSSL KNIRL
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| GNAT_fam |
GNAT_fam |
In4 |
501 |
6118-6618 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Target: | aminoglycoside antibiotic (ARO:0000016) |
| Sequence Family: | GNAT |
Protein Sequence:
|
MDSEEPPNVR VACSGDIDEV VRLMHDAAAW MSAKGTPAWD VARIDRTFAE TFVLRSELLV ASCSDGIVGC CTLSAEDPEF WPDALKGEAA YLHKLAVRRT
HAGRGVSSAL IEACRHAART QGCAKLRLDC HPNLRGLYER LGFTHVDTFN PGWDPTFIAE RLELEI
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| sul1 (ARO:3000410) |
Sul1 |
In4 |
840 |
6746-7585 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic target replacement (ARO:0001002) |
| Transpoase Chemistry: | dihydropteroate synthase |
| Target: | sulfonamide antibiotic (ARO:3000282)||sulfone antibiotic (ARO:3003401) |
| Sequence Family: | sulfonamide resistant sul (ARO:3004238) |
| Comment: | perfect match to reference sequence for ARO:3000410 |
Protein Sequence:
|
MVTVFGILNL TEDSFFDESR RLDPAGAVTA AIEMLRVGSD VVDVGPAASH PDARPVSPAD EIRRIAPLLD ALSDQMHRVS IDSFQPETQR YALKRGVGYL
NDIQGFPDPA LYPDIAEADC RLVVMHSAQR DGIATRTGHL RPEDALDEIV RFFEARVSAL RRSGVAADRL ILDPGMGFFL SPAPETSLHV LSNLQKLKSA
LGLPLLVSVS RKSFLGATVG LPVKDLGPAS LAAELHAIGN GADYVRTHAP GDLRSAITFS ETLAKFRSRD ARDRGLDHA
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| qacEdelta1 (ARO:3005010) |
QacEdelta1 |
In4 |
348 |
7579-7926 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic efflux (ARO:0010000) |
| Target: | disinfecting agents and antiseptics (ARO:3005386) |
| Sequence Family: | major facilitator superfamily (MFS) antibiotic efflux pump (ARO:0010002) |
| Comment: | subunit of the qac multidrug efflux pump||perfect match to reference sequence for ARO:3005010 (bitscore:219) |
Protein Sequence:
|
MKGWLFLVIA IVGEVIATSA LKSSEGFTKL APSAVVIIGY GIAFYFLSLV LKSIPVGVAY AVWSGLGVVI ITAIAWLLHG QKLDAWGFVG MGLIIAAFLL
ARSPSWKSLR RPTPW
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| cmlA6 (ARO:3002696) |
CmlA6 |
In4 |
1260 |
8118-9377 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic efflux (ARO:0010000) |
| Target: | phenicol antibiotic (ARO:3000387) |
| Sequence Family: | major facilitator superfamily (MFS) antibiotic efflux pump (ARO:0010002) |
| Comment: | strict match to reference sequence for ARO:3002696 (bitscore: 819) |
Protein Sequence:
|
MSSKNFSWRY SLAATVLLLS PFDLLASLGM DMYLPAVPFM PNALGTTAST IQLTLTTYLV MIGAGQLLFG PLSDRLGRRP VLLGGGLAYV VASMGLALTS
SAEVFLGLRI LQACGASACL VSTFATVRDI YAGREESNVI YGILGSMLAM VPAVGPLLGA LVDMWLGWRA IFAFLGLGMI AASAAAWRFW PETRVQRVAG
LQWSQLLLPV KCLNFWLYTL CYAAGMGSFF VFFSIAPGLM MGRQGVSQLG FSLLFATVAI AMVFTARFMG RVIPKWGSPS VLRMGMGCLI AGAVLLAITE
IWALQSVLGF IAPMWLVGIG VATAVSVAPN GALRGFDHVA GTVTAVYFCL GGVLLGSIGT LIISLLPRNT AWPVVVYCLT LATVVLGLSC VSRVKGSRGQ
GEHDVVALQS AESTSNPNR
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| aadA3 (ARO:3002603) |
AadA3 |
In4 |
792 |
9639-10430 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Target: | aminoglycoside antibiotic (ARO:0000016) |
| Sequence Family: | ANT(3'') (ARO:3004275) |
| Comment: | strict match to reference sequence for ARO:3002603 (bitscore: 522) |
Protein Sequence:
|
MRVAVTIEIS NQLSEVLSVI ERHLESTLLA VHLYGSAVDG GLKPYSDIDL LVTVAVKLDE TTRRALLNDL MEASAFPGES ETLRAIEVTL VVHDDIIPWR
YPAKRELQFG EWQRNDILAG IFEPAMIDID LAILLTKARE HSVALVGPAA EEFFDPVPEQ DLFEALRETL KLWNSQPDWA GDERNVVLTL SRIWYSAITG
KIAPKDVAAD WAIKRLPAQY QPVLLEAKQA YLGQKEDHLA SRADHLEEFI RFVKGEIIKS VGK
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| DUF1010 family protein |
DUF1010 family protein |
In4 |
246 |
10436-10681 |
- |
| Class: | Passenger Gene |
| Sub Class: | Other |
| Sequence Family: | DUF1010 (Pfam:PF06231) |
| Comment: | BLAST: WP_032492246.1 |
Protein Sequence:
|
MRAATYFSAP PCSKGFLAFW ASSACAASAT SYPSCSAAPL SWSSGFSWAA PFFKAGRSLL AFGSNSAVKR TRILRAAYLG R
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| AAC(3)-Ia (ARO:3002528) |
AAC(3)-Ia |
In4 |
465 |
10799-11263 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Target: | aminoglycoside antibiotic (ARO:0000016) |
| Sequence Family: | AAC(3) (ARO:3000322) |
| Comment: | perfect match to reference sequence for ARO:3002528||Synonyms: AAC(3)-Ia C, aacC1, aacC-A1 |
Protein Sequence:
|
MGIIRTCRLG PDQVKSMRAA LDLFGREFGD VATYSQHQPD SDYLGNLLRS KTFIALAAFD QEAVVGALAA YVLPRFEQPR SEIYIYDLAV SGEHRRQGIA
TALINLLKHE ANALGAYVIY VQADYGDDPA VALYTKLGIR EEVMHFDIDP STAT
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| intI1 |
IntI1 |
In4 |
1014 |
11434-12447 |
+ |
| Class: | Integron Integrase |
| Sub Class: | Class 1 |
| Transpoase Chemistry: | Tyrosine |
| Sequence Family: | Class 1 Integron Tyrosine Integrase |
Protein Sequence:
|
MKTATAPLPP LRSVKVLDQL RERIRYLHYS LRTEQAYVNW VRAFIRFHGV RHPATLGSSE VEAFLSWLAN ERKVSVSTHR QALAALLFFY GKVLCTDLPW
LQEIGRPRPS RRLPVVLTPD EVVRILGFLE GEHRLFAQLL YGTGMRISEG LQLRVKDLDF DHGTIIVREG KGSKDRALML PESLAPTLRE QLSRARAWWL
KDQAEGRSGV ALPDALERKY PRAGHSWPWF WVFAQHTHST DPRSGVVRRH HMYDQTFQRA FKRAVEQAGI TKPATPHTLR HSFATALLRS GYDIRTVQDL
LGHSDVSTTM IYTHVLKVGG AGVRSPLDAL PPLTSER
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpR |
TnpR |
Tn1696 |
558 |
12753-13310 |
+ |
| Class: | Accessory Gene |
| Sub Class: | Resolvase |
| Transpoase Chemistry: | Serine |
| Sequence Family: | Serine Site-Specific Recombinase |
Protein Sequence:
|
MQGQRIGYVR VSSFDQNPER QLEGVQVARV FTDKASGKDT QRPELERLLA FVREGDTVVV HSMDRLARNL DDLRRIVQGL TQRGVRMEFV KEGLKFTGED
SPMANLMLSV MGAFAEFERA LIRERQREGI VLAKQRGAYR GRKKSLNSEQ IAELKRRVAA GDQKTLVARD FGISRETLYQ YLRED
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpA |
TnpA |
Tn1696 |
2973 |
13313-16285 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MPRRSILSAT ERESLLALPD AKDELIRHYT FNETDLSVIR QRRGAANRLG FAVQLCYLRF PGTFLGVDEP PFPPLLRMVA AQLKMPVESW SEYGQREQTR
REHLVELQTV FGFKPFTMSH YRQAVHTLTE LALQTDKGIV LASALVENLR RQSIILPAMN AIERASAEAI TRANRRIYAA LTDSLLSPHR QRLDELLKRK
DGSKVTWLAW LRQSPAKPNS RHMLEHIERL KSWQALDLPA GIERQVHQNR LLKIAREGGQ MTPADLAKFE VQRRYATLVA LAIEGMATVT DEIIDLHDRI
IGKLFNAAKN KHQQQFQASG KAINDKVRMY GRIGQALIEA KQSGSDPFAA IEAVMPWDTF AASVTEAQTL ARPADFDFLH HIGESYATLR RYAPQFLGVL
KLRAAPAAKG VLDAIDMLRG MNSDSARKVP ADAPTAFIKP RWAKLVLTDD GIDRRYYELC ALSELKNALR SGDVWVQGSR QFKDFDEYLV PVEKFATLKL
ASELPLAVAT DCDQYLHDRL ELLEAQLATV NRMAAANDLP DAIITTASGL KITPLDAAVP DAAQAMIDQT AMLLPHLKIT ELLMEVDEWT GFTRHFTHLK
TSDTAKDKTL LLTTILADAI NLGLTKMAES CPGTTYAKLS WLQAWHIRDE TYSTALAELV NAQFRQPFAG NWGDGTTSSS DGQNFRTGSK AESTGHINPK
YGSSPGRTFY THISDQYAPF SAKVVNVGIR DSTYVLDGLL YHESDLRIEE HYTDTAGFTD HVFGLMHLLG FRFAPRIRDL GETKLFIPKG DAAYDALKPM
ISSDRLNIKQ IRAHWDEILR LATSIKQGTV TASLMLRKLG SYPRQNGLAV ALRELGRIER TLFILDWLQS VELRRRVHAG LNKGEARNAL ARAVFFYRLG
EIRDRSFEQQ RYRASGLNLV TAAIVLWNTV YLERATSALR GNGTALDDTL LQYLSPLGWE HINLTGDYLW RSSAKVGAGK FRPLRPLPPA
|
|
| Internal Transposable Elements (TE) |
|
|
| TnCentral Accession |
TE Name |
Type |
Coordinates |
Length |
| In4-U12338.3 |
In4 |
Integron |
4320-12649 |
8330 |
| IS6100-U12338.3 |
IS6100 |
Insertion Sequence |
4793-5672 |
880 |
|
| Internal Repeat Elements |
|
|
| Name |
Associated Mobile Element |
Coordinates |
Sequence (Top Strand) |
| IRt |
In4 |
4320-4352 |
TGTCATTTTC AGAAGACGAC TGCACCAGTT GAT |
| repeat t1 |
In4 |
4328-4346 |
TCAGAAGACG ACTGCACCA |
| repeat t2 |
In4 |
4368-4386 |
AACACGTCGG TCGAGGACT |
| repeat t3 |
In4 |
4397-4416 |
TCAGAAGTGA TCTGCACCAA |
| repeat t4 |
In4 |
4429-4447 |
TCAATACTCG TGTGCACCA |
| IRR |
IS6100 |
4793-4806 |
GGCTCTGTTG CAAA |
| IRL |
IS6100 |
5659-5672 |
AAACGTTGTC TCGG |
| repeat t3 |
In4 |
5699-5718 |
AACCACGTCT AGTGAAGACT |
| repeat t2 |
In4 |
5729-5747 |
TCAGGAGCTG GCTGCACAA |
| IRt |
In4 |
5763-5795 |
TAGTTGACCA CGTCAGCAGA AGACTTTTAC TGT |
| repeat t1 |
In4 |
5769-5787 |
ACCACGTCAG CAGAAGACT |
| repeat i4 |
In4 |
12530-12548 |
AGGAGGGACG CAGGCGACT |
| repeat i3 |
In4 |
12558-12576 |
CGTCGGGCAG CAACGGACT |
| repeat i2 |
In4 |
12600-12618 |
ATCACGTCAG CCGAAGACT |
| IRi |
In4 |
12617-12649 |
CTGCAAGTCA CGTCGGCAGA AGACTTTTGC TGT |
| repeat i1 |
In4 |
12623-12641 |
GTCACGTCGG CAGAAGACT |
| IRR |
Tn1696 |
16281-16318 |
GAATCGCACG AAATAAAAGG CAAAAGACTC TGCTGGGG |
|
| References |
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| 1. | Wohlleben W, Arnold W, Bissonnette L, Pelletier A, Tanguay A, Roy PH, Gamboa GC, Barry GF, Aubert E, Davies J, et al. On the evolution of Tn21-like multiresistance transposons: sequence analysis of the gene (aacC1) for gentamicin acetyltransferase-3-I(AAC(3)-I), another member of the Tn21-based expression cassette. Mol Gen Genet. 1989 Jun;217(2-3):202-8. doi: 10.1007/BF02464882. PubMed ID: 2549372
| | | 2. | Bissonnette L, Champetier S, Buisson JP, Roy PH. Characterization of the nonenzymatic chloramphenicol resistance (cmlA) gene of the In4 integron of Tn1696: similarity of the product to transmembrane transport proteins. J Bacteriol. 1991 Jul;173(14):4493-502. doi: 10.1128/jb.173.14.4493-4502.1991. PubMed ID: 1648560
| | | 3. | Stokes HW, Hall RM. Sequence analysis of the inducible chloramphenicol resistance determinant in the Tn1696 integron suggests regulation by translational attenuation. Plasmid. 1991 Jul;26(1):10-9. doi: 10.1016/0147-619x(91)90032-r. PubMed ID: 1658833
| | | 4. | Hall RM, Brown HJ, Brookes DE, Stokes HW. Integrons found in different locations have identical 5' ends but variable 3' ends. J Bacteriol. 1994 Oct;176(20):6286-94. doi: 10.1128/jb.176.20.6286-6294.1994. PubMed ID: 7929000
| | | 5. | Smith DI, Lus RG, Rubio Calvo MC, Datta N, Jacob AE, Hedges RW. Third type of plasmid conferring gentamicin resistance in Pseudomonas aeruginosa. Antimicrob Agents Chemother. 1975 Sep;8(3):227-30. doi: 10.1128/aac.8.3.227. PubMed ID: 810080
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