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| Name: Tn1332 |
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| Family: Tn3 Group: Tn3 |
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| Evidence of Transposition: no |
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| Host |
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| Host Organism: | Pseudomonas putida 9335 | | |
| Place of Origin: | France | Date of Isolation: | January 2004 |
| | Other Geographic Information: | Marseilles, bronchial aspirate |
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| Map |
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| Terminal Inverted Repeats (IR) |
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| IRL (Length: 38 bp) |  | GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAG |
| IRR (Length: 38 bp) | | GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAG |
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| Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGGGTCTGAC GCTCAGTGGA ACGAAAACTC ACGTTAAGGG ATTTTGGTCA TGAGATTATC AAAAAGGATC TTCACCTAGG GAAGGTCTGA AGTAGCCCTG 100
TATTTCCGGT CGACTTCAGC CCTCGCTGCT TTTGAAAGCG GGCCGTCGAT CAAATTCGAC CAGGTAACCC GCTCAGTTCT CCGTTTTTGG CCGCCGCGAG 200
CACCTCGCAG CAGCCATTTT CCGCATTACA GGTGCACCTT TCCTGCGGTA GTCAGCAAAT GTCGGCGCGC CATCCATAGG TTCGACAGCG CGAACAGCGT 300
CACCAGCTGA GCGGTGTTCT TGGCCAGGCC ACGGAAGCGC ACCTTCACGT AACCGAACTG GCGCTTGATC ACTCGAAACG GGTGCTCGAC CTTCGCTCGC 400
ACTTGTGCCT TGGCCTTCTC GATCTTGCGC TTGGCTTTGT ACAGGGCGCT GCGTTTATCG AGCTTCTTGT AGGTGCTGCG GCGTGCTGCG ACCTGCCAGA 500
TCACTTCGCG GCCAGCATGT TCGGGGCGCT TTTCGACGCC GGTGTAGCCG GCATCGGCGC AGACGACGTT CTCGTCACCG TGCAGCAGTT TGTCGACCTG 600
GGTGATATCC GCCACGTTGG CTGCCGTGCC TACCACGCTG TGTACCAGCC CCGACTCATC ATCCACGCCG ATGTGCGCCT TCATGCCAAA GTAATACTGG 700
TTCCCTTTCT TGCTCTGGTG CATTTCCGGG TCGCGCTTGC CGTCCTGGTT CTTGGTCGAG CTGGGCGCGT GGATCAGTGT GGCATCGACG ATAGTGCCCT 800
GGCGCAGCGA CAGGCCGCGA TCCCCCAGGT AGCCATTGAT TACGCCGAGG ATGCCGGCTG CCAGCTCATG TTTCTCCAGC AAGCGACGGA ACTTGAGGAT 900
GGTGGTTTCG TCGGGAATAC GCTCGAGGCT CAGCCCGGCG AACTGACGCA GGATGGTCGT CTCGTAGAGC GCTTCTTCCA TGGCCGGGTC GCTGTAGCCG 1000
AACCAGTTCT GCATCAGATG GATACGTAAC ATGGCCATCA GCGGATAGGC TGGACGACCA CCTTCACCCT TTGGGTAGTG TGGCTCGATC AGGGCAATCA 1100
ATCCCTTCCA CGGCACCACC TGATCCATCT CGATCAGGAA CAATTCCTTA CGGGTCTGCT TGCGCTTGCC GGCGTACTCG GCGTCGGCGA AGGTCATCTG 1200
CTTCATGGAA AAACTCGGCT GGCGGGATCG GCGTATTTCA CCAGATTCAG GAAGTCTTTT TCAGACCTTC CCTAGATCCT TTTAAATTAA AAATGAAGTT 1300
TTAAATCAAT CTAAAGTATA TATGAGTAAA CTTGGTCTGA CAGTTACCAA TGCTTAATCA GTGAGGCACC TATCTCAGCG ATCTGTCTAT TTCGTTCATC 1400
CATAGTTGCC TGACTCCCCG TCGTGTAGAT AACTACGATA CGGGAGGGCT TACCATCTGG CCCCAGTGCT GCAATGATAC CGCGAGACCC ACGCTCACCG 1500
GCTCCAGATT TATCAGCAAT AAACCAGCCA GCCGGAAGGG CCGAGCGCAG AAGTGGTCCT GCAACTTTAT CCGCCTCCAT CCAGTCTATT AATTGTTGCC 1600
GGGAAGCTAG AGTAAGTAGT TCGCCAGTTA ATAGTTTGCG CAACGTTGTT GCCATTGCTG CAGGCATCGT GGTGTCACGC TCGTCGTTTG GTATGGCTTC 1700
ATTCAGCTCC GGTTCCCAAC GATCAAGGCG AGTTACATGA TCCCCCATGT TGTGCAAAAA AGCGGTTAGC TCCTTCGGTC CTCCGATCGT TGTCAGAAGT 1800
AAGTTGGCCG CAGTGTTATC ACTCATGGTT ATGGCAGCAC TGCATAATTC TCTTACTGTC ATGCCATCCG TAAGATGCTT TTCTGTGACT GGTGAGTACT 1900
CAACCAAGTC ATTCTGAGAA TAGTGTATGC GGCGACCGAG TTGCTCTTGC CCGGCGTCAA CACGGGATAA TACCGCGCCA CATAGCAGAA CTTTAAAAGT 2000
GCTCATCATT GGAAAACGTT CTTCGGGGCG AAAACTCTCA AGGATCTTAC CGCTGTTGAG ATCCAGTTCG ATGTAACCCA CTCGTGCACC CAACTGATCT 2100
TCAGCATCTT TTACTTTCAC CAGCGTTTCT GGGTGAGCAA AAACAGGAAG GCAAAATGCC GCAAAAAAGG GAATAAGGGC GACACGGAAA TGTTGAATAC 2200
TCATACTCTT CCTTTTTCAA TATTATTGAA GCATTTATCA GGGTTATTGT CTCATGAGCG GATACATATT TGAATGTATT TAGAAAAATA AACAAATAGG 2300
GGTTCCGCGC ACATTTCCCC GAAAAGTGCC ACCTGACGTC TAAGAAACCA TTATTATCAT GACATTAACC TATAAAAATA GGCGTATCAC GAGGCCCTTT 2400
CGTCTTCAAG AATTTTATAA ACCGTGGAGC GGGCAATACT GAGCTGATGA GCAATTTCCG TTGCACCAGT GCCCTTCTGA TGAAGCGTCA GCACGACGTT 2500
CCTGTCCACG GTACGCCTGC GGCCAAATTT GATTCCTTTC AGCTTTGCTT CCTGTCGGCC CTCATTCGTG CGCTCTAGGA TCCTCCGGCG TTCAGCCTGT 2600
GCCACAGCCG ACAGGATGGT GACCACCATT TGCCCCATAT CACCGTCGGT ACTGATCCCG TCGTCAATAA ACCGAACCGC TACACCCTGA GCATCAAACT 2700
CTTTTCATGA TATATCTCCC AATTTGTGTA GGGCTTATTA TGCACGCTTA AAAATAATAA AAGCAGACTT GACCTGATAG TTTGGCTGTG ACGCAATTAT 2800
GTGCTTAGTG CATCTAACGT TCAAGGTGAG CGGACTCGCG CGGCTTTATG CGCGAGGTCC GCTCGAGCGC AGGGTTATGC ATCTGCTCTC GATGACGCCA 2900
CATATCATTT GTTACCCATC AACACGGGTA ATTCCACGAG AATATCCTCT CGTGCTTTAG ACCCGCCGGG AATATCGGAC TTTTCCTTTC CTATTTCCAA 3000
TCGGGCGAAA ACAACTTGCC GTCCGTTTTT TTCAGCCCAG CCCACGAACC AGCCCTGCGG ACGACTTTCA TTTATCTTGC CGTTATTGTC CCGAAGCCAG 3100
CCGCTGCCGC TTTTTCCATG TACAGCCCAT CCTTCGGCTG CCTGGTACTG CGGGATTGTG GCATACGCCA TGTCATAAGC CGCTTCGGAT ACAGGCAGCT 3200
TATGCGCGAC AAAGCGTAGA AGAAACTGAA TTTGCTCCTT GGGAGATATG GTGAGCGACG ACATCAGCCA TGACTGGGTC AAGCCGTTAT GCTTCCCCGA 3300
GTCACCGGAA ACATCTTGAT TACCGTACTC AAATTTCTTT ACGTATTCCG TGAACCGATC AACTCCCAGA CGGCTTGTTA ATTGCTGCGA GAACCAGACA 3400
ACAGAGTCGC TTTGCCATAG CGCCGGATAG ACTTGTTTGT ATGTGCGATC TCTCGGAGAC GGGTTGTATT CCGGCTTCAA TTCCCACGTA GGTGATTTTG 3500
GCGACTGCAA GATTCCACTA TCAAACCCCA TGATTGCCAA TGGAAGTTTA AAAGACGAGC ACGGAGACAC ACGACGGGCA CATTCTCCGG TCTCATATAA 3600
GGTATTTCCG GTAATGGCGT CTGCGATGAT GGTGCATTTA AGCGTTTCAA CCTCATCAGA AGCCACGGAA CTGATTGGGA GAGTGGCGGA AACGAACACC 3700
AACATATGCA GCAGCAAAAT TTTTTTCATC AAGGTATCCT TCATTGCTCC GCTGTGCGCT TAATAGGTGC ATAACTTTGT TTTAGACATT ATTTGCCGAC 3800
TACCTTGGTG ATCTCGCCTT TCACGTAGTG AACAAATTCT TCCAACTGAT CTGCGCGCGA GGCCAAGCGA TCTTCTTGTC CAAGATAAGC CTGCCTAGCT 3900
TCAAGTATGA CGGGCTGATA CTGGGCCGGC AGGCGCTCCA TTGCCCAGTC GGCAGCGACA TCCTTCGGCG CGATTTTGCC GGTTACTGCG CTGTACCAAA 4000
TGCGGGACAA CGTAAGCACT ACATTTCGCT CATCGCCAGC CCAGTCGGGC GGCGAGTTCC ATAGCGTTAA GGTTTCATTT AGCGCCTCAA ATAGATCCTG 4100
TTCAGGAACC GGATCAAAGA GTTCCTCCGC CGCTGGACCT ACCAAGGCAA CGCTATGTTC TCTTGCTTTT GTCAGCAAGA TAGCCAGATC AATGTCGATC 4200
GTGGCTGGCT CGAAGATACC TGCAAGAATG TCATTGCGCT GCCATTCTCC AAATTGCAGT TCGCGCTTAG CTGGATAACG CCACGGAATG ATGTCGTCGT 4300
GCACAACAAT GGTGACTTCT ACAGCGCGGA GAATCTCGCT CTCTCCAGGG GAAGCCGAAG TTTCCAAAAG GTCGTTGATC AAAGCTCGCC GCGTTGTTTC 4400
ATCAAGCCTT ACGGTCACCG TAACCAGCAA ATCAATATCA CTGTGTGGCT TCAGGCCGCC ATCCACTGCG GAGCCGTACA AATGTACGGC CAGCAACGTC 4500
GGTTCGAGAT GGCGCTCGAT GACGCCAACT ACCTCTGATA GTTGAGTCGA TACTTCGGCG ATCACCGCTT CCCTCATGAT GTTTAACGCC GAAGTTCAGC 4600
CGCCAGAACG GAGCGCAGCG GAGTGATGGT CGGCTGCAAC TTCATGTTAT GCCGCATCTG CCTGCTACTC AACGACTGAG CGATTTGTGT GCGCTTTTAC 4700
AACATTCGTT GTGTGCTTGA GCAAGTCTAG ACCGCCCGGC AGGCCGTGCC CCGGAATGAC GAACTGTGCT TCCGGGTAGT GTTGTTGAAT CCGCTCAATG 4800
GAGGTGGGCC ATTCAGCCAG ATCGGCATCG GCCACGTTCC CCGCAGACGT GCGTGACAAC TCATAAATCG CACAACCACC ATAGAGCACA CTCGCAGACG 4900
GGACGTACAC AACTAAGTTG TCGGTCGAAT GCGCAGCACC AGGATAGAAG AGTTCTACTG GACCGAAGCG CACTGCGTCC CCGCTCGATG AGAGTCCTTC 5000
TAGAGAGTGC GTGGGAATCT CGTTCCCCTC TACCTCGGCT AGCCGGCGTG TCGACGGTGA TGCGTACGTT GCCACCCCAG CCGCCCGAAG GACATCAACG 5100
CCGCCGACGC GGTCGTCATG AAAGTGCGTG GAGACTGCAC GCGTTACAGG AAGTCCAATT TGCTTCTCAA TCTCCGCGAG AAGTGCCGCT GTGTTTTTCG 5200
CACCCCACGC TGTATCAATC AAAAGCAACT CATCACCATC ACGGACAATG AGACCATTGG ACGGGTAGAC TGCGCCATCA AACGACTGCG TTGCGATATG 5300
CGACCAAACA CCATCGGCAA TCTGGTAAAG CCGGACCTCC CCGACCGGAA TTTCGCTGAC TGTCGGATAC TCACCGCTAG AATCTACGGA AAAAGCGAGC 5400
GGACTCGCAA TAGCCATGAT AGACGCGGTC AAATAGACCA ATAACTTACT CAAAAGTTTG AACATCAAAA CTCCATGGGG GTGAGTGCGG CATAACGTTT 5500
GACATGAGGG GCGGCCAAGG GCGCCAGCCC TTGGACGTCC CCCTCGATGG AAGGGTTAGG CAACACTGCG TGTTCGCTCG AATGCCTGGC GTGTTTGAAC 5600
CATGTACACG GCTGGACCAT CTGGGGTGGT TACGGTACCT TGCCTCTCAA ACCCCGCTTT CTCGTAGCAT CGGATCGCTC GCAAGTTGCT CGGCGACGGG 5700
TCCGTTTGGA TCTTGGTGAC CTCGGGATCA TTGAACAGCA ACTCAACCAG AGCTCGAACC AGCTTGGTTC CCAAGCCTTT GCCCAGTTGT GATGCATTCG 5800
CCAGTAACTG GTCTATTCCG CGTACTCCTG GATCGGTTTC TTCTTCCCAC CATCCGTCCC CGCTTCCAAG AGCAACGTAC GACTGGGCAT ACCCAATCGG 5900
CTCTCCATTC AGCATTGCAA TGTATGGAGT GACGGACTCT TGCGCTAAAA CGCTTGGCAA GTACTGTTCC TGTACGTCAG CAAGTGTCGG GCGTGCTTCT 6000
TCTCCGCCCC ACCACTCGAC GATATGAGAT CGATTTAGCC ACTCATAGAG CATCGCAAGG TCATGCTCAG TCATGAGGCG CAGTGTGACG GAATCGTTGC 6100
TGTTGGTCAC GATGCTGTAC TTTGTGATGC CTAACTTTGT TTGGAAATGT TGAATACTCA TACTCTTCCT TTTTCAATAT TATTGAAGCA TTTATCAGGG 6200
TTATTGTCTC ATGAGCGGAT ACATATTTGA ATGTATTTAG AAAAATAAAC AAATAGGGGT TCCGCGCACA TTTCCCCGAA AAGTGCCACC TGACGTCTAA 6300
GAAACCATTA TTATCATGCC TGAATTCATA GAATAAGCGC AACGCTTGAA ACGAGAGGCA GAGAGCCAGC CACCGGTAGA ATCCAGGCTC TCACACCGAA 6400
GGATTCAAGC GCAGATGACT ACGCATTACC GGCAGCTGAC TCAGGGACAA CGTTACCAGA TTGAGGCTGG CTTGAGCGCC GCAGAGAGCC AGGCGAGCAT 6500
TGCAAAGCGG GTCGGCGTGC ATCCCTCGAC GATCAGTCGC GAGGTTCGCC GCAACAGCAC CCAGAATATC TACAAGGCTG TTTCTGCGGC CCATGAAAGT 6600
GATGCTCGTC GAGCGGGTGC GCGCAAGTTT TGCAAGCCGG CGACATGGCT CAGCCATCAT CTCCCGGTGT GGCTCAAGCA TGGCATGAGT CCGGAGCAGA 6700
TCGCCCAGCG GTTGAAGCAG GAGCAGCCAA GCCGGGCGGT CAGCCATGAG TGGATTTATC GGTTCATTGC CGCCGAACAG CGCGCCGGTG GTGAGCTTTA 6800
TACCTATCTG CGACATCGCC GAAAGCGCTA CCGGAAACGC TATGGAAGCC ACGATCGGCG CGGGCAGCTG CGTAATCGCG TGTCAATCAG TGAACGCCCA 6900
GCCGAGGTCG AAAGCCGCGA GCGCCTGGGG GACTGGGAGG GCGATACGGT ACATGGACTG GGCGGTAACC TGGTGACCCT GGTTGATCGC AAAAGCGGCT 7000
ATCTGAGCGC CTATCCGGTC AAGCGCAGAA CGCGCCGGCA GGTAACGCGG GCGATCAATC TGATGCTTCA GGGCCATGCC GCTCACACGC TGACGCTGGA 7100
TAACGGAAGG GAGTTTGCCG GGCATGAACG CATCGCGCTA CGGAGCCAGT GCCAGGTCTT TTTTGCAGAC CCCTATTCAT CCTGGCAACG TGGCACCAAT 7200
GAAAACACCA ACGGTCTGCT CCGCCAGTAT TTCCCCAAGG GCAGCGACTT CAGCAAGCTG ACCGTCGAAG CCGTCAATCG GACAGTAGCG AGGATCAATC 7300
TACGCCCGCG CAAGCGCTTG GGCTGGAAGA CGCCGTACGA AGTGCATACA GGGGTGAGCG TTGCACTTAT GTGTTGAATT CAGGATGACA TTAACCTATA 7400
AAAATAGGCG TATCACGAGG CCCTTTCGTC TTCAAGAATT TTATAAACCG TGGAGCGGGC AATACTGAGC TGATGAGCAA TTTCCGTTGC ACCAGTGCCC 7500
TTCTGATGAA GCGTCAGCAC GACGTTCCTG TCCACGGTAC GCCTGCGGCC AAATTTGATT CCTTTCAGCT TTGCTTCCTG TCGGCCCTCA TTCGTGCGCT 7600
CTAGGATCCT CCGGCGTTCA GCCTGTGCCA CAGCCGACAG GATGGTGACC ACCATTTGCC CCATATCACC GTCGGTACTG ATCCCGTCGT CAATAAACCG 7700
AACCGCTACA CCCTGAGCAT CAAACTCTTT TATCAGTTGG ATCATGTCGG CGGTGTCGCG GCCAAGACGG TCGAGCTTCT TCACCAGAAT GACATCACCT 7800
TCCTCCACCT TCATCCTCAG CAAATCCAGC CCTTCCCGAT CTGTTGAACT GCCGGATGCC TTGTCGGTAA AGATGCGGTT AGCTTTTACC CCTGCATCTT 7900
TGAGCGCTCT GATCTGAATA TCGAGGGACT GCTGGCTGGT TGAGACCCGC GCATAACCAA AAATTCGCAT AAAAATGTAC CTTAAATCGA ATATCAGACA 8000
CGATGTGTCT ATTATGCCAA AATGACGATT TAATGGACAC TCAAACGAAG CCGTTTTACT ATGTCTGATA ATTTATAACA TTTCGTACGG TTGGAAAAAT 8100
GTTACTAAAT GCCCGTCAGG CAGGGAGGCC GATATGCCCG TTGACTTTCT GACCACTGAG CAGACTGAAA GCTATGGCAG ATTCACCGGT GAACCGGATG 8200
AGCTTCAGCT GGCACGATAT TTTCACCTTG ATGAAGCAGA CAAGGAATTT ATCGGAAAAA GCAGAGGTGA TCACAACCGT CTGGGCATTG CCCTGCAAAT 8300
TGGATGTGTC CGTTTTCTGG GCACCTTCCT CACCGATATG AATCATATTC CTTCCGGCGT CCGGCATTTT ACCGCCAGAC AGCTCGGGAT TCGTGATATC 8400
ACCGTTCTTG CAGAATACGG TCAGAGGGAA AATACCCGCC GTGAGCATGC AGCGCTGATA CGTCAGCACT ATCAGTATCG TGAATTTGCC TGGCCCTGGA 8500
CATTTCGCCT TACCCGTCTT TTATATACCC GGAGCTGGAT AAGCAACGAA CGTCCTGGCC TGCTTTTCGA TCTGGCGACA GGGTGGCTTA TGCAACATCG 8600
TATTATTCTC CCCGGAGCCA CTACGCTGAC CCGGTTGATT TCAGAGGTAA GGGAAAAGGC GACGTTGCGC CTGTGGAACA AACTGGCACT GATACCGTCA 8700
GCCGAACAGC GTTCACAGCT GGAGATGCTG CTGGGGCCAA CTGATTGCAG CCGCCTGTCT TTACTGGAAT CACTGAAAAA GGGCCCTGTG ACCATCAGTG 8800
GTCCGGCGTT TAATGAAGCA ATTGAACGCT GGAAAACTCT GAACGATTTT GGCCTGCATG CTGAAAACCT GAGTACACTC CCGGCTGTGC GCCTGAAAAA 8900
TCTCGCACGT TATGCTGGTA TGACTTCGGT GTTCAATATT GCCAGGATGT CACCGCAGAA AAGGATGGCG GTTCTGGTTG CCTTTGTCCT TGCATGGGAA 9000
ACGCTGGCGC TGGATGATGC ATTGGACGTT CTGGACGCCA TGCTGGCCGT TATCATCCGT GACGCCAGAA AGATTGGGCA GAAAAAACGG CTCCGCTCGC 9100
TGAAGGATCT GGATAAATCT GCATTGGCGC TCGCCAGCGC ATGTTCGTAC CTGCTGAAAG AAGAAACACC GGACGAATCG ATTCGTGCTG AGGTGTTCAG 9200
CTACATCCCA AGGCAAAAGC TGGCTGAAAT CATCACGCTT GTCCGTGAAA TTGCCCGGCC CTCAGACGAT AATTTTCATG AAGAAATGGT GGAGCAGTAC 9300
GGGCGCGTTC GTCGTTTCCT GCCCCATCTG CTGAATACCG TTAAATTTTC ATCCGCACCT GCCGGGGTTA CCACTCTGAA TGCCTGTGAC TACCTCAGCC 9400
GGGAGTTCAG CTCACGGCGG CAGTTTTTTG ACGACGCACC AACGGAAATT ATCAGTCGGT CATGGAAACG GCTGGTGATT AACAAGGAAA AACATATCAC 9500
CCGCAGGGGA TACACGCTCT GCTTTCTCAG TAAACTGCAG GATAGTCTGA GGCGGAGGGA TGTCTACGTT ACCGGCAGTA ACCGGTGGGG AGATCCTCGT 9600
GCAAGATTAC TACAGGGTGC TGACTGGCAG GCAAACCGGA TTAAGGTTTA TCGTTCTTTG GGGCACCCGA CAGACCCGCA GGAAGCAATA AAATCTCTGG 9700
GCCATCAGCT TGATAGTCGT TACAGACAGG TTGCTGCACG TCTTGGCGAA AATGAGGCTG TCGAACTCGA TGTTTCTGGC CCGAAGCCCC GGTTGACAAT 9800
TTCTCCCCTC GCCAGTCTTG ATGAGCCGGA CAGTCTGAAA CGACTGAGCA AAATGATCAG TGATCTGCTC CCTCCGGTGG ATTTAACGGA GTTGCTGCTC 9900
GAAATTAACG CCCATACCGG ATTTGCTGAT GAGTTTTTCC ATGCCAGTGA AGCCAGTGCC AGAGTTGATG ATCTGCCCGT CAGCATCAGC GCCGTGCTGA 10000
TGGCTGAAGC CTGCAATATC GGTCTGGAAC CACTGATCAG ATCAAATGTT CCTGCACTGA CCCGACACCG GCTGAACTGG ACAAAAGCGA ACTATCTGCG 10100
GGCTGAAACT ATCACCAGCG CTAATGCCAG ACTGGTTGAT TTTCAGGCAA CGCTGCCACT GGCACAGATA TGGGGTGGAG GAGAAGTGGC ATCTGCAGAT 10200
GGAATGCGCT TTGTTACGCC AGTCAGAACA ATCAATGCCG GACCGAACCG CAAATACTTT GGTAATAACA GAGGGATCAC CTGGTACAAC TTTGTGTCCG 10300
ATCAGTATTC CGGCTTTCAT GGCATCGTTA TACCGGGGAC GCTGAGGGAC TCTATCTTTG TGCTGGAAGG CCTTCTGGAA CAGGAGACCG GGCTGAATCC 10400
AACCGAAATT ATGACCGATA CGGCAGGTGC CAGCGATCTT GTCTTTGGCC TTTTCTGGCT GCTGGGATAC CAGTTTTCTC CACGCCTGGC TGATGCCGGT 10500
GCTTCGGTTT TCTGGCGAAT GGACCATGAT GCCGACTATG GCGTGCTGAA TGATATTGCC AGAGGGCAAT CAGATCCCCG AAAAATAGTC CTTCAGTGGG 10600
ACGAAATGAT CCGGACCGCA GGCTCCCTGA AGCTGGGCAA AGTACAGGCC TCAGTGCTGG TCCGTTCATT GCTGAAAAGT GAACGTCCCT CCGGACTGAC 10700
TCAGGCAATC ATTGAAGTGG GGCGCATCAA CAAAACGCTG TATCTGCTTA ATTATATTGA TGATGAAGAT TACCGCCGGC GCATTCTGAC CCAGCTTAAT 10800
CGGGGAGAAA GCCGTCATGC AGTTGCCAGA GCCATCTGTC ACGGTCAAAA AGGTGAGATA AGAAAACGAT ATACCGACGG TCAGGAAGAT CAGTTGGGAG 10900
CTCTGGGGCT GGTCACTAAC GCCGTCGTGT TATGGAACAC TATTTATATG CAGGCAGCTC TGGATCATCT CCGGGCGCAG GGTGAAACAC TGAATGATGA 11000
AGATATCGCA CGCCTCTCCC CGCTTTGCCA CGGACATATC AATATGCTCG GCCATTATTC CTTCACGCTG GCAGAACTGG TGACCAAAGG ACATCTGAGA 11100
CCATTAAAAG AGGCGTCAGA GGCAGAAAAC GTTGCTTAAC GTGAGTTTTC GTTCCACTGA GCGTCAGACC CC
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| Recombination Sites |
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| Name |
Coordinates |
Gene |
Sequence |
| attC bla OXA-9 core |
2818-2886 |
69 |
CGTTCAAGGT GAGCGGACTC GCGCGGCTTT ATGCGCGAGG TCCGCTCGAG CGCAGGGTTA
TGCATCTGC |
| attC aadA core |
3733-3787 |
55 |
GGTATCCTTC ATTGCTCCGC TGTGCGCTTA ATAGGTGCAT AACTTTGTTT TAGAC |
| attC AAC(6')-Ib core |
5496-5561 |
66 |
CGTTTGACAT GAGGGGCGGC CAAGGGCGCC AGCCCTTGGA CGTCCCCCTC GATGGAAGGG
TTAGGC |
| res |
7973-8093 |
121 |
AAATGTACCT TAAATCGAAT ATCAGACACG ATGTGTCTAT TATGCCAAAA TGACGATTTA
ATGGACACTC AAACGAAGCC GTTTTACTAT GTCTGATAAT TTATAACATT TCGTACGGTT
G |
| res_site_III_a |
7976-7998 |
23 |
TGTACCTTAA ATCGAATATC AGA |
| res_site_II_a |
8004-8039 |
36 |
TGTGTCTATT ATGCCAAAAT GACGATTTAA TGGACA |
| res_site_I_b |
8062-8090 |
29 |
TGTCTGATAA TTTATAACAT TTCGTACGG |
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| ORFs |
|
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpA |
TnpA |
ISPpu18 |
981 |
226-1206 |
- |
| Class: | Transposase |
| Function: | transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MKQMTFADAE YAGKRKQTRK ELFLIEMDQV VPWKGLIALI EPHYPKGEGG RPAYPLMAML RIHLMQNWFG YSDPAMEEAL YETTILRQFA GLSLERIPDE
TTILKFRRLL EKHELAAGIL GVINGYLGDR GLSLRQGTIV DATLIHAPSS TKNQDGKRDP EMHQSKKGNQ YYFGMKAHIG VDDESGLVHS VVGTAANVAD
ITQVDKLLHG DENVVCADAG YTGVEKRPEH AGREVIWQVA ARRSTYKKLD KRSALYKAKR KIEKAKAQVR AKVEHPFRVI KRQFGYVKVR FRGLAKNTAQ
LVTLFALSNL WMARRHLLTT AGKVHL
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| bla TEM-1 (ARO:3000873) |
Bla TEM-1 |
Tn1332 |
861 |
1344-2204 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Target: | penem (ARO:3003706)||cephalosporin (ARO:0000032)||monobactam (ARO:0000004)||penam (ARO:3000008) |
| Sequence Family: | TEM beta-lactamase (ARO:3000014) |
| Comment: | perfect match to reference sequence for ARO:3000873||Synonyms: TEM-98, RTEM-1 |
Protein Sequence:
|
MSIQHFRVAL IPFFAAFCLP VFAHPETLVK VKDAEDQLGA RVGYIELDLN SGKILESFRP EERFPMMSTF KVLLCGAVLS RVDAGQEQLG RRIHYSQNDL
VEYSPVTEKH LTDGMTVREL CSAAITMSDN TAANLLLTTI GGPKELTAFL HNMGDHVTRL DRWEPELNEA IPNDERDTTM PAAMATTLRK LLTGELLTLA
SRQQLIDWME ADKVAGPLLR SALPAGWFIA DKSGAGERGS RGIIAALGPD GKPSRIVVIY TTGSQATMDE RNRQIAEIGA SLIKHW
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpR_p |
TnpR_p |
Tn1332 |
319 |
2387-2705 |
- |
| Class: | Accessory Gene |
| Sub Class: | Resolvase |
| Transpoase Chemistry: | Serine |
| Sequence Family: | Serine Site-Specific Recombinase |
| Comment: | C-terminal fragment |
Protein Sequence:
|
KRV*CSGCSG SVY*RRDQYR R*YGANGGHH PVGCGTG*TP EDPRAHE*GP TGSKAERNQI WPQAYRGQER RADASSEGHW CNGNCSSAQY CPLHGL*NS*
RRKGLV
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| OXA-9 (ARO:3001404) |
OXA-9 |
Tn1332 |
840 |
2905-3744 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Target: | cephalosporin (ARO:0000032)||penam (ARO:3000008) |
| Sequence Family: | OXA beta-lactamase (ARO:3000017) |
| Comment: | perfect match to reference sequence for ARO:3001404 |
Protein Sequence:
|
MKDTLMKKIL LLHMLVFVSA TLPISSVASD EVETLKCTII ADAITGNTLY ETGECARRVS PCSSFKLPLA IMGFDSGILQ SPKSPTWELK PEYNPSPRDR
TYKQVYPALW QSDSVVWFSQ QLTSRLGVDR FTEYVKKFEY GNQDVSGDSG KHNGLTQSWL MSSLTISPKE QIQFLLRFVA HKLPVSEAAY DMAYATIPQY
QAAEGWAVHG KSGSGWLRDN NGKINESRPQ GWFVGWAEKN GRQVVFARLE IGKEKSDIPG GSKAREDILV ELPVLMGNK
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| ANT(3'')-IIa (ARO:3004089) |
ANT(3'')-IIa |
Tn1332 |
789 |
3789-4577 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Target: | aminoglycoside antibiotic (ARO:0000016) |
| Sequence Family: | ANT(3'') (ARO:3004275) |
| Comment: | strict match to reference sequence for ARO:3004089 (bitscore: 569)||Synonym: ANT(9)(3'') |
Protein Sequence:
|
MREAVIAEVS TQLSEVVGVI ERHLEPTLLA VHLYGSAVDG GLKPHSDIDL LVTVTVRLDE TTRRALINDL LETSASPGES EILRAVEVTI VVHDDIIPWR
YPAKRELQFG EWQRNDILAG IFEPATIDID LAILLTKARE HSVALVGPAA EELFDPVPEQ DLFEALNETL TLWNSPPDWA GDERNVVLTL SRIWYSAVTG
KIAPKDVAAD WAMERLPAQY QPVILEARQA YLGQEDRLAS RADQLEEFVH YVKGEITKVV GK
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| bla VIM-17 (ARO:3002287) |
Bla VIM-17 |
Tn1332 |
801 |
4665-5465 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Target: | cephamycin (ARO:0000044)||cephalosporin (ARO:0000032)||penam (ARO:3000008)||carbapenem (ARO:0000020)||penem (ARO:3003706) |
| Sequence Family: | VIM beta-lactamase (ARO:3000021) |
| Comment: | strict match to reference sequence for ARO:3002287 (bitscore: 538) |
Protein Sequence:
|
MFKLLSKLLV YLTASIMAIA SPLAFSVDSS GEYPTVSEIP VGEVRLYQIA DGVWSHIATQ SFDGAVYPSN GLIVRDGDEL LLIDTAWGAK NTAALLAEIE
KQIGLPVTRA VSTHFHDDRV GGVDVLRAAG VATYASPSTR RLAEVEGNEI PTHSLEGLSS SGDAVRFGPV ELFYPGAAHS TDNLVVYVPS ASVLYGGCAI
YELSRTSAGN VADADLAEWP TSIERIQQHY PEAQFVIPGH GLPGGLDLLK HTTNVVKAHT NRSVVE
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| AAC(6')-Ib10 (ARO:3002581) |
AAC(6')-Ib10 |
Tn1332 |
555 |
5556-6110 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Transpoase Chemistry: | aminoglycoside acetyltransferase |
| Target: | aminoglycoside antibiotic (ARO:0000016) |
| Sequence Family: | AAC(6') (ARO:3000345) |
| Comment: | strict match to reference sequence for ARO:3002581 (bitscore: 377) |
Protein Sequence:
|
MTNSNDSVTL RLMTEHDLAM LYEWLNRSHI VEWWGGEEAR PTLADVQEQY LPSVLAQESV TPYIAMLNGE PIGYAQSYVA LGSGDGWWEE ETDPGVRGID
QLLANASQLG KGLGTKLVRA LVELLFNDPE VTKIQTDPSP SNLRAIRCYE KAGFERQGTV TTPDGPAVYM VQTRQAFERT RSVA
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpA |
TnpA |
ISPpu17 |
963 |
6415-7377 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MTTHYRQLTQ GQRYQIEAGL SAAESQASIA KRVGVHPSTI SREVRRNSTQ NIYKAVSAAH ESDARRAGAR KFCKPATWLS HHLPVWLKHG MSPEQIAQRL
KQEQPSRAVS HEWIYRFIAA EQRAGGELYT YLRHRRKRYR KRYGSHDRRG QLRNRVSISE RPAEVESRER LGDWEGDTVH GLGGNLVTLV DRKSGYLSAY
PVKRRTRRQV TRAINLMLQG HAAHTLTLDN GREFAGHERI ALRSQCQVFF ADPYSSWQRG TNENTNGLLR QYFPKGSDFS KLTVEAVNRT VARINLRPRK
RLGWKTPYEV HTGVSVALMC
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpR |
TnpR |
Tn1332 |
558 |
7413-7970 |
- |
| Class: | Accessory Gene |
| Sub Class: | Resolvase |
| Function: | resolvase; serine site-specific recombinase |
| Transpoase Chemistry: | Serine |
| Sequence Family: | Serine Site-Specific Recombinase |
Protein Sequence:
|
MRIFGYARVS TSQQSLDIQI RALKDAGVKA NRIFTDKASG SSTDREGLDL LRMKVEEGDV ILVKKLDRLG RDTADMIQLI KEFDAQGVAV RFIDDGISTD
GDMGQMVVTI LSAVAQAERR RILERTNEGR QEAKLKGIKF GRRRTVDRNV VLTLHQKGTG ATEIAHQLSI ARSTVYKILE DERAS
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpA |
TnpA |
Tn1332 |
3006 |
8134-11139 |
+ |
| Class: | Transposase |
| Function: | transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MPVDFLTTEQ TESYGRFTGE PDELQLARYF HLDEADKEFI GKSRGDHNRL GIALQIGCVR FLGTFLTDMN HIPSGVRHFT ARQLGIRDIT VLAEYGQREN
TRREHAALIR QHYQYREFAW PWTFRLTRLL YTRSWISNER PGLLFDLATG WLMQHRIILP GATTLTRLIS EVREKATLRL WNKLALIPSA EQRSQLEMLL
GPTDCSRLSL LESLKKGPVT ISGPAFNEAI ERWKTLNDFG LHAENLSTLP AVRLKNLARY AGMTSVFNIA RMSPQKRMAV LVAFVLAWET LALDDALDVL
DAMLAVIIRD ARKIGQKKRL RSLKDLDKSA LALASACSYL LKEETPDESI RAEVFSYIPR QKLAEIITLV REIARPSDDN FHEEMVEQYG RVRRFLPHLL
NTVKFSSAPA GVTTLNACDY LSREFSSRRQ FFDDAPTEII SRSWKRLVIN KEKHITRRGY TLCFLSKLQD SLRRRDVYVT GSNRWGDPRA RLLQGADWQA
NRIKVYRSLG HPTDPQEAIK SLGHQLDSRY RQVAARLGEN EAVELDVSGP KPRLTISPLA SLDEPDSLKR LSKMISDLLP PVDLTELLLE INAHTGFADE
FFHASEASAR VDDLPVSISA VLMAEACNIG LEPLIRSNVP ALTRHRLNWT KANYLRAETI TSANARLVDF QATLPLAQIW GGGEVASADG MRFVTPVRTI
NAGPNRKYFG NNRGITWYNF VSDQYSGFHG IVIPGTLRDS IFVLEGLLEQ ETGLNPTEIM TDTAGASDLV FGLFWLLGYQ FSPRLADAGA SVFWRMDHDA
DYGVLNDIAR GQSDPRKIVL QWDEMIRTAG SLKLGKVQAS VLVRSLLKSE RPSGLTQAII EVGRINKTLY LLNYIDDEDY RRRILTQLNR GESRHAVARA
ICHGQKGEIR KRYTDGQEDQ LGALGLVTNA VVLWNTIYMQ AALDHLRAQG ETLNDEDIAR LSPLCHGHIN MLGHYSFTLA ELVTKGHLRP LKEASEAENV
A
|
|
| Internal Transposable Elements (TE) |
|
|
| TnCentral Accession |
TE Name |
Type |
Coordinates |
Length |
| ISPpu18-DQ174113.1 |
ISPpu18 |
Insertion Sequence |
80-1271 |
1192 |
| ISPpu17-DQ174113.1 |
ISPpu17 |
Insertion Sequence |
6319-7384 |
1066 |
|
| Internal Repeat Elements |
|
|
| Name |
Associated Mobile Element |
Coordinates |
Sequence (Top Strand) |
| IRR |
ISPpu18 |
80-91 |
GGAAGGTCTG AA |
| IRL |
ISPpu18 |
1260-1271 |
AAGTCTGGAA GG |
| IRL |
ISPpu17 |
6319-6340 |
CCTGAATTCA TAGAATAAGC GC |
| IRR |
ISPpu17 |
7363-7384 |
CGTGAATACA CAACTTAAGT CC |
|
| References |
|
|
Poirel L, Cabanne L, Collet L, Nordmann P. Class II transposon-borne structure harboring metallo-beta-lactamase gene blaVIM-2 in Pseudomonas putida. Antimicrob Agents Chemother. 2006 Aug;50(8):2889-91. doi: 10.1128/AAC.00398-06. PubMed ID: 16870796
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