TN Report

Transposon

Name: IS26 (Synonyms: IS6||IS46||IS140||IS160)

Family: IS6

Evidence of Transposition: yes

Host

Host Organism:	Proteus vulgaris

Map

Terminal Inverted Repeats (IR)


IRL (Length: 14 bp)		GGCACTGTTGCAAA
IRR (Length: 14 bp)		GGCACTGTTGCAAA

Sequence

DNA Sequence

Length 820

--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100

GGCACTGTTG CAAATAGTCG GTGGTGATAA ACTTATCATC CCCTTTTGCT GATGGAGCTG CACATGAACC CATTCAAAGG CCGGCATTTT CAGCGTGACA 100
TCATTCTGTG GGCCGTACGC TGGTACTGCA AATACGGCAT CAGTTACCGT GAGCTGCAGG AGATGCTGGC TGAACGCGGA GTGAATGTCG ATCACTCCAC 200
GATTTACCGC TGGGTTCAGC GTTATGCGCC TGAAATGGAA AAACGGCTGC GCTGGTACTG GCGTAACCCT TCCGATCTTT GCCCGTGGCA CATGGATGAA 300
ACCTACGTGA AGGTCAATGG CCGCTGGGCG TATCTGTACC GGGCCGTCGA CAGCCGGGGC CGCACTGTCG ATTTTTATCT CTCCTCCCGT CGTAACAGCA 400
AAGCTGCATA CCGGTTTCTG GGTAAAATCC TCAACAACGT GAAGAAGTGG CAGATCCCGC GATTCATCAA CACGGATAAA GCGCCCGCCT ATGGTCGCGC 500
GCTTGCTCTG CTCAAACGCG AAGGCCGGTG CCCGTCTGAC GTTGAACACC GACAGATTAA GTACCGGAAC AACGTGATTG AATGCGATCA TGGCAAACTG 600
AAACGGATAA TCGGCGCCAC GCTGGGATTT AAATCCATGA AGACGGCTTA CGCCACCATC AAAGGTATTG AGGTGATGCG TGCACTACGC AAAGGCCAGG 700
CCTCAGCATT TTATTATGGT GATCCCCTGG GCGAAATGCG CCTGGTAAGC AGAGTTTTTG AAATGTAAGG CCTTTGAATA AGACAAAAGG CTGCCTCATC 800
GCTAACTTTG CAACAGTGCC

ORFs

ORF Summary

Gene Name	Associated TE	Coordinates	Class	Sub Class	Orientation
tnpA	IS26	64-768	Transposase		+

ORF Details

Gene Name	Protein Name	Associated TE	Gene Length	Coordinates	Strand
tnpA	TnpA	IS26	705	64-768	+

Class:	Transposase
Transpoase Chemistry:	DDE
Protein Sequence:	MNPFKGRHFQ RDIILWAVRW YCKYGISYRE LQEMLAERGV NVDHSTIYRW VQRYAPEMEK RLRWYWRNPS DLCPWHMDET YVKVNGRWAY LYRAVDSRGR TVDFYLSSRR NSKAAYRFLG KILNNVKKWQ IPRFINTDKA PAYGRALALL KREGRCPSDV EHRQIKYRNN VIECDHGKLK RIIGATLGFK SMKTAYATIK GIEVMRALRK GQASAFYYGD PLGEMRLVSR VFEM